Galdieria sulphuraria: Gasu_52230
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Entry
Gasu_52230 CDS
T02926
Name
(RefSeq) splice factor, putative isoform 1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Gasu_52230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsl03041
]
Gasu_52230
Spliceosome [BR:
gsl03041
]
Common components
Common spliceosomal components
SR proteins
Gasu_52230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_7
DbpA
LEM
Motif
Other DBs
NCBI-GeneID:
17086172
NCBI-ProteinID:
XP_005703764
UniProt:
M2XV08
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MSLFVGNVSSSVSKRELQDLFEKYGKCRIDLKRGFMFVDYDEEAEAKDALESLQGKQVGG
LKINVEWSRRYKYGGRGGLRGRGGFRGRPPRRRYYRSRSRSSSRDRRYRRRYSYSSGSSV
SSPRRRHHRRHSYSPSSSMSRSDSYYSGDSRDYSSDSRSYHSTSRSPASSRSSRRRKRSY
SPSRSRSYSDASRSPPRHRRRRRRSPSYSRSRSRSRSYSRSVSYSRSPSYSRSPSHSRSR
SPSRSASHSSRSYSRSPVERKRVKEESNSPRPQDVEEMRSTKDISEQELHESKSIGEHEE
SSPTQDKLEEGNHDASIENEQATETNEEESPSAQDHNTTSASQSNEDDLYKMTVKELKAE
LKKHGIDDPKLKLKKDLVERLSQEMENN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctattcgtaggaaatgtttcgtcgagtgtttctaaacgggaactacaggacttg
tttgaaaaatatggaaagtgtcggatagacttgaaaagagggtttatgtttgtagactac
gacgaagaagctgaagcaaaggatgcgttggagtctttacaaggaaagcaagtaggaggc
ttaaaaatcaatgttgagtggtcgagaagatataagtatggaggtagaggaggattgaga
ggcagagggggatttcgaggaagaccaccgagacgtcgatattatagaagccgtagtcgt
tcgagttcgagggatagaagatatcgaagaaggtatagttattcttctggttctagtgtc
tcatctcctcggagacgacatcaccgccgacactcatattctccttcttcttctatgtct
cgttcggattcatattattctggcgattctagagactactcttcggattcaagatcatat
catagtacgagtcgttcgcctgcttcatcccgttcttctcgcaggagaaagcgcagttat
tcaccaagtcgttctagaagttattctgatgcttcccgctcaccacctcgtcatcgaagg
agaagaagaaggagtccgagttattcccgttcgcgctcgagatcacgttcctattctcgt
tccgtttcatattctcgttcaccctcatattccaggtcaccttctcattcacgttcaaga
tctccttctaggtcagcatcacattcttcgcggagctatagtcgttctcctgtagaaaga
aagagggtcaaagaggaaagcaattctcccagaccacaagatgtggaagaaatgcgttcg
acgaaggatattagtgagcaggagttgcacgagtcgaaatcaataggagaacatgaagaa
tcatctccaacacaagacaagttggaagaaggtaatcatgatgcatcgattgaaaatgaa
caagcaacagaaaccaatgaagaggaatcgccttctgctcaagaccataacacaacatca
gctagccaaagtaacgaggatgatttgtataaaatgacggtgaaagagttgaaagcagag
ttgaagaagcatggaatagatgaccctaagttgaagttgaaaaaggacttggtggaacgt
ttatcacaagagatggaaaacaattga
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integrated database retrieval system
