Galdieria sulphuraria: Gasu_52610 Help Entry Gasu_52610        CDS       T02926                                  Name (RefSeq) hypothetical protein   KO K14772   U3 small nucleolar RNA-associated protein 20 Organism gsl  Galdieria sulphuraria Brite KEGG Orthology (KO) [BR:gsl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:gsl03009]     Gasu_52610 Ribosome biogenesis [BR:gsl03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     Gasu_52610 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  E3_UFM1_ligase UTP20 UFL1_C UFL1 Motif Other DBs NCBI-GeneID:  17086089 NCBI-ProteinID:  XP_005703679 UniProt:  M2XUR4 LinkDB All DBs Position Unknown AA seq 3411 aa AA seqDB search MSTKVLNVLENRGSKKYKFLKKKDRLNLVNIGEYRPWTEPVRQEKLKKPNFTFFREALDY WSELDVSADFVSFRQKTNLYGHSLSLLLAKRRRTVKLLLNRLRKRPRTIAFQSLCGCLLA FVRDIRHRFVEYIPVTWKVLSEFMDFESEEIMSCIFSTLNSLGKILWEPMLKQFPKTWNL WKPFIVHKTSQVRVLAAQCFGFVLRKGIVEDMLPNMITQIFQEVTVPSLESIKCREMLQR TVDGVCESFIQILVSPIGKQLLSKSDLVLKTLLQQAFMDNECFACSGFFVLQQLFVKILK QIPYSGTQWLFVHLLDFLKYDLLSNEVVIVNNIENKSSCRFPYFLSICLMGFCCLNDFSH VITIDNIWNAFQSILQMTDIITESYVMDAFSYSCLFYSLENLLLLLANEDASQLNILWSQ LMEQYIRNAYFPLFLKRMIVSISYHSKLINIFCHNSLYLYWERFKVCPENELYWQVLLAL CKQHVEIDVGIDVIQQLFTSALSYLSNHTSEMSLFRSLLDICCEIRNDRMLREWESFLEK YYLKNGQVDSSSKWLMSRVCSKMLISGCSLSSWFHEWIQELVFLEDEVEMQVLRASLISL QTHGVLCKKTRVSFNLKEIAPNHLLKCLLFASIKKRQVVLELLSTIGKWVEWKDCSVFEL IFAVENVPKIPTYVSESLLKTQRVIDYLQYQRKGLTSIADSSPVMYVLCFETLTWLRCEL SPVQPNIYEIWKHLCRLCPNAVLFAVKQVLSMDLSQITKEPRTLEEHISSVMCTEHSQIQ NAIFQWIQLNQKHFKSFIFYYEALKSLLENGQNSNDSKVMEFSDIIESECKEKDWLDERM NFNSWHIQLLKAIEATLPDSEIIALHLLKSFFMIVVGRNAAKNAFAEWSFKLMERYLSLF LCCHKEQHRLTTFAEWVKDNYQAIEDRLLSVIVSGKGNTQQLALSCQVRCMQPFLSSYET WLIRLQSSKHFKDVYTHFFAALFQNVSIQMLGTSESSLSIQTSHLVEIKKLVLQILLGKL NDITEKAKLETNVLTLLSGFREPDDVNLLWRLLWQPLLDCMGLDQVEEVLERIDDIPWND KLRFSICLEKIQKAIPLSLFALNMRETLQRWCIGCLYRTQDGNVFMESNKGIRHQLRSVS LYLLSSIIDSSLPLSEFMISNIFDWLRNMRSTLEAYRPNDGQTPAMLIALDKITSCEPLT FRIMENQHLCECCIELMLKFIRYYRQNEDTLFYCVSIWKHLFSVAQDNNICLSCLEGKSK REEIWLSLTNNIFRIWDTIKRPGKSHSRKLQSLDALLEMMLQFDYHQSVTTGIDKQLQSP FEKLLKHIVSTLGNIHYWKHASHVAEKSKDLMALYIQRMDGQKWLSHLICSKLAYILFEL NTVILEDHCVIEKVDQMLLELCKCLAEKLSESWLNVVSEHLPDMLCIVNENGKDCIEIER RVNALEVVVSNLESLLDLTTEHSVEGLFVSNERDCPPSYIPLLLLSYACFRNIVLEDLSL CILAGRGLKAVGRFLISQLAKNVSDSSMQYDIVLQQLVESCNVLLFSHSSFGIQRVLFMT IGTWVYTWYSICSDSSRRTIQIPCLECFFPMISSSLSNIEESWFANMVHLQLHRRCRACL EISRKVDVCQPFANILMKFAISWTFQRCLESINATRNGTMERWYQVMSILVDTSVQKMAW QDYKHFLERILKKWIHMKNCMHPTSKKEWNLWIKLGEIFISSLPKWIELENKNRKELYLG RDTNDDGDIHESQQSGVVYDPYQNYMEERLIPLIARVLKELSYSSISIEEKKYSRITPQF ADLLIRALHSLDDSQREKYVNEIIRYLTSQIRSKSQRQRELARNCFCTMLKHWGVSYMRR IYDATKATCQDGFRVYVLRYSIFYYVKCLAENNMIIQDADLVREWMNIFQEEISSLVDDQ ENRIPYQECKEVSSFYIHDALTLLAKIAQGKESWDLWKYFLTSCCRLNGVKNPSRKKQLV RNFFPHLVKSLLSCPDLNQALWFVYALMKEKQPLTGKDGQKEEKLSLEESSILLLEFALQ LLYRLLKRLNSQVNPTQYEDVLKTFFPMVNQLFRTKNEFLCSYSLRVIQLLWKVTALPRT PKHWNDIFQYASSLLSNVSRLDGTGSSSNGALVHAAIRTLSTIITKLPANGHKNKSWQEE YIIPLIRIMQQIFSSVSVDWMPSLLHLIRVFVKHRLGFRAPEMFSLMNTLSQMAIQSSEK AVREAIVSIWIDFILHYPIPESVFHEYVQYFVSNLQYPYSFGRQASANILSKWLLESSTS PIWKEKEISLFVATSAQKANEEDLQVRQTFSNLLITLFSCMDEQRRVYVLEMIEEWSSNE KKELQLFAIVVVECLCDISNLRKSELALLLKISGKCLQSMSLQFSSLEATDVHFAFGALL SCLERILKHRPDWIVRESFLDIYKCMWQYELFATNTLSVRRKLDSLIASLSLSLETLNGV LERKAEHLLLLNAEDTFLATLLNCCIDHLSVDPLADDTAKLLSENINRLLNWMEKFRSND IRKSTVEHISLDCLMKLSKIASGPNLPSDTFGTFRRQIALELVRDRLKVAHSIWSTNVST EESYARPLIRLMLRCWRDFGEPQRQQLNRKRKKKSLKTSLDETETIQLVLQDIESLRRQL QQVQLGKVNKSLSERNCIELVSKLVERGLVQVLYTQDGREYVTFERLQEEVLEELKFHGG RLNLMDLISLLGVDLPYIESATERILKRDNTLRLEQGVLYSQTYFVSVAQEVEELLQTMN FTTIADLSSRFDLRMDMMSEIVHKYLDTIIHGKIEKNIIYNTGYVRQLEATVFGTLKAAC LPVSLHHLAKRIHSSVEWIRENAEVWCVQKKLEGFLQGNGENTLFVPNFFDRKRFQIIEE NYSRNRYVDYRFLKLFYIQEPQKYCQEHFGDGFLISSCAVHPEMLSFLESSSLDAIRNGH WLDWNLILPIHWKTEDRQILFSLTSELKACCLFEPSEQLNLLRTKGEDNNESGVGLVIRW RWIFSIQLIRKFYKLFYDWSMKEASSSLSEENMLASDELYKLNAETQLQQSKKKRKGKTK KETVEDRSTNETVISKLSFSLEHCLHSLRQYSEVEPIFEFDALGNTSEEDLLRILVEDIF SKAWEEIRRDVIREAREHLILETKTKDEKLRSELVKLLRRLYFYSRNLKKFSDQIVEEEE RDVLEQVDSYICRTLGTEVLEATVTYLGFTLGFRIEGQTISSKEWRKMLEKLPPYMQESV KKLEAIFRNENKQNKLESFRLAAWLLEFYDRFKNSEVPVVPSLSSQETEHLRHEEFQEMK TALENAMEAPDILSKALRIMLVKHFDVFIIFPGKSIPKLVKIVEARLQSSLNNQLQKVLL RLHEIAVDSLRAKTVKDTKERQTQSDINSEEAMSVIEEFKTLLNDEHYLKE NT seq 10236 nt NT seq  +upstreamnt  +downstreamnt atgtcgacgaaagttctcaacgtattagagaacagaggcagcaaaaaatacaagtttctg aagaaaaaggatagattgaacctggtaaacattggagaatatagaccttggacagaaccg gtccgtcaagaaaaacttaaaaaaccaaattttactttcttcagagaggctttggactat tggtcagaactggacgtttctgcagactttgtcagttttcggcagaagacaaacctctat ggtcattctttatcactattgttagcgaaacgtagacgtactgtgaaacttttgttgaat agattacgtaagagaccgagaactattgcatttcagagtctatgtggttgtcttcttgct tttgtgagagatatcagacaccgcttcgtggagtatattcctgtaacttggaaggtttta tcggaatttatggactttgaaagcgaagaaataatgtcttgtatattctctacattgaat agcctcggaaaaatcttatgggaacccatgttgaagcagtttccgaagacttggaatctc tggaagcccttcattgtacacaagacaagtcaagtcagagtgttggctgctcagtgtttt ggttttgtccttagaaaaggaattgtggaagatatgctcccgaatatgataactcaaata ttccaagaagtaacagttccttccctagagtctattaaatgcagagaaatgcttcaacgt actgtcgatggagtttgtgagagttttatacaaatcttagtatcacctatcggaaagcaa ttgttatcaaagtctgacttggttttgaagacattactacaacaagcattcatggacaac gaatgttttgcttgttctgggttttttgttttgcagcaattgtttgtaaagattttgaag caaattccctattcaggaacgcagtggttgttcgtgcatttattagactttttgaagtat gacttactttccaatgaggtagttatagtgaataatatagaaaacaagtcttcatgtcgc tttccttactttttgtctatatgtttgatgggcttttgttgtttgaatgacttttcccat gtcattactatcgataacatttggaatgcttttcaatcgatacttcaaatgacggacatc atcactgaaagctatgtcatggatgctttttcttattcttgtctattttattctttggaa aatttgctgttacttttggcaaacgaggatgcatctcagttgaacattctttggagtcag ttgatggaacagtatattcgaaatgcatactttcctctttttctgaagagaatgattgta tctatatcttatcattcgaagcttatcaatattttttgccataatagtttatatttatat tgggaacgattcaaagtttgtccagagaatgaactttattggcaagttcttttggctctt tgtaaacaacatgtagagattgacgttggtatcgacgtgattcaacagctctttacatct gcgttatcctatctttccaatcatacaagtgaaatgtcattgtttaggtcgttgcttgac atttgttgtgagatacgaaatgacagaatgttgagagaatgggaatcgtttcttgagaag tattatttaaagaatggacaagtagactcctcttcgaaatggttaatgtcacgagtatgt tcaaaaatgctgatttccggttgttctttgagtagttggtttcatgaatggattcaagag ctggttttcctagaagatgaagtagagatgcaagtcctacgagcatctttgatttcccta cagacacatggtgtattatgcaagaaaacaagagtttctttcaacttgaaggaaattgct cccaatcatttgttaaagtgcctactatttgcttctatcaagaaacgacaagtggttttg gaattgttgtcaactattggcaagtgggttgaatggaaggattgttccgtgttcgagttg atttttgctgttgagaatgtaccaaagattccaacatatgtttcagagtcacttctaaaa actcaacgtgtcattgactatttgcaatatcaaagaaaaggattgacctctattgcagat agttcacccgttatgtacgtattgtgttttgaaactctgacgtggttacgatgtgaatta tcacctgtgcaaccaaatatttacgaaatatggaaacacttgtgtagactgtgtccgaat gcggtgttgtttgcagtgaaacaagtattgtcgatggatttgtcacaaataacgaaggaa ccccggacattagaggaacatatatcttcagtcatgtgtaccgaacattcgcaaatacaa aacgccatttttcaatggattcaattgaaccagaagcatttcaagtctttcatattctat tatgaagccttaaaaagtctccttgagaatggccaaaattcgaacgattctaaagtaatg gagttttcagatataatagaaagtgaatgcaaggaaaaagattggttagatgaaagaatg aattttaattcttggcatattcaattgttgaaagcaatagaagcaacgcttcctgatagc gaaatcatcgcattgcatcttttgaagagtttttttatgattgtggttggcagaaatgct gctaagaacgctttcgcagaatggagtttcaagttgatggaacgctatttatcgcttttc ttgtgttgtcataaggaacaacatcgtttgacaacatttgcagaatgggtaaaagacaat tatcaagccattgaagaccgactcttatcagtaattgtaagtggtaaaggtaatactcaa caattggcattatcatgtcaagttcgttgtatgcagccttttttgtcatcatatgaaact tggttaattcgtttgcaaagttcaaagcattttaaggacgtttatactcatttctttgcg gcattatttcagaatgtgagcattcagatgctgggaacatcggaaagttcgttatccatt caaacctcacatttagtggaaatcaaaaagttggttcttcagatattacttggaaagttg aatgatattactgaaaaagctaaacttgaaaccaatgttttgaccttactttcagggttt agagaacctgacgatgtgaaccttctttggcgtttgttatggcaacctttattagattgt atgggtcttgaccaagtagaggaggtactcgagcgcatagatgatattccttggaatgat aaacttcgtttcagtatttgtttggagaaaatacagaaagccattcctctttctttattt gcgctgaacatgcgagaaactttgcaaaggtggtgcattggttgtttataccgtactcaa gatggaaatgtctttatggagagtaacaaaggaattagacatcaacttcggtcagtcagt ctctatctcttatcttctatcatagactcttccttgcctctttcagagttcatgatttcc aatatctttgactggttaagaaacatgcgttctacgttggaagcatatcgaccaaatgac ggtcaaacaccagcaatgttaatagctctggataagattacctcttgtgaacctcttacc tttagaattatggaaaatcaacatctctgtgaatgttgtattgaattgatgctcaaattt attcgttattaccgtcaaaatgaagatacattattctactgtgtgtctatttggaagcat ttatttagtgtcgctcaagacaacaacatttgtttgagttgtttggaaggaaaatccaag cgagaagagatatggctatccttgacaaacaacatttttcgtatttgggatacaattaag cgtcctggtaaaagtcattcgaggaagcttcagtcgctggatgctctgttggaaatgatg cttcaatttgattatcatcaaagcgtcactacaggaatagataaacaactccaaagtcct tttgaaaaattgttaaagcacatagtttccactcttggaaatattcattattggaaacat gcatctcatgtggcagaaaaaagcaaagacttgatggctttatacattcaaagaatggat ggtcagaagtggctttcacatttaatttgttcaaaactggcatatattcttttcgaattg aataccgtcattctagaagatcactgtgttattgagaaggtggatcagatgttacttgaa ttgtgcaagtgtcttgccgagaaattatcagaaagttggctaaatgttgtttcggaacat ttgcctgatatgttgtgtatcgtaaatgaaaatggcaaagattgtatagagatagaacga agagtcaatgctttggaagtcgttgtatccaatttagagtcattgctcgatctaacaaca gaacatagtgttgaaggattgtttgtttctaatgaaagagattgtcctcctagttacata cctttgctattgcttagttacgcatgcttcagaaacatagttttagaggaccttagttta tgcattttggctggaagaggtttgaaagcagtaggaagatttctcatttcacaacttgca aagaatgtaagcgattcttcgatgcaatatgacattgtgttgcaacaactagtagagtca tgtaacgtgttgttgttttcacattcctcttttggcatacaacgggtattgtttatgact attggtacttgggtatacacttggtactctatttgtagtgattcaagccgtcgaactatt cagataccttgtttagaatgcttctttccgatgatatcctctagtttaagcaatatagaa gaaagttggtttgccaatatggtccatttacaattacatcgtcgttgtcgtgcgtgttta gaaatcagtcgcaaagtggacgtttgtcaaccttttgctaatatactcatgaaatttgct atttcatggacatttcaaagatgtttggaatccatcaatgcaactagaaatggaacaatg gagcgttggtatcaagtaatgagtatattggtcgatacgagtgtccaaaagatggcgtgg caagattacaaacattttttggaaagaatactaaagaaatggattcatatgaagaattgt atgcatccaacttctaagaaggagtggaatctatggataaaacttggcgagattttcatt tcttcgttaccaaaatggatagaattggagaataagaacagaaaagaattatacttggga agggatacgaacgacgatggagatattcatgagtcacagcaatcaggagttgtttatgat ccttatcaaaattatatggaagagaggttgattcctctgattgctcgagtcttgaaagaa cttagctactcctcaatctctattgaagagaagaaatatagccgtatcactccacagttt gccgatcttctcattcgtgctttgcatagtttagatgattctcaacgagaaaaatatgtc aatgagattatacgctatttgaccagtcagatacgttccaagtctcagagacaaagagag ttggcaagaaattgtttttgtacaatgttgaagcattggggagtttcttatatgcgtcgt atttatgatgcaacgaaggccacttgtcaggatggattccgtgtttatgtattgcgttac tctattttttattatgtcaaatgtctagctgagaataatatgatcatccaagatgctgat ttggttagagaatggatgaatatctttcaagaggaaatttctagtctcgtggatgatcaa gaaaatagaattccctatcaagagtgtaaagaagtctcctcattttatattcatgatgct ttaactctattggcgaagattgcacaaggaaaggaatcgtgggatttatggaagtacttt ttgacgagttgttgtcgattgaatggagtaaaaaatccttccaggaagaaacaacttgtg cgcaatttctttccgcatttggtaaaaagtttattatcttgtcctgatttgaatcaagct ctttggtttgtatatgctctcatgaaggaaaagcagccgttgacgggaaaagatggacaa aaagaagaaaaattatctttggaagagtcgtctattctcctattggaatttgcgttacaa ttactttatcgtctactgaagcgtttgaatagccaagtgaacccaactcaatatgaggat gtattgaagacattctttccaatggtcaatcagttgtttcgtaccaaaaacgaatttctt tgtagctacagtttgagagtcattcagttgttatggaaagtaactgctcttcctcgtaca ccaaaacactggaatgatatctttcaatatgcttccagtcttttatcaaatgtcagtcgg ttggatggaacaggttcctcaagcaatggtgctttggtacatgctgctattcgaactttg tcaactatcattactaagttacctgcaaatggtcacaagaacaaatcttggcaagaagag tatatcattcctctaataagaattatgcaacagatattttctagtgtttcagtagattgg atgccttcactgttgcatttgatacgtgtctttgtgaaacatcgtttgggctttcgtgct cctgaaatgttttcactgatgaacacactttcacaaatggcaatacagagttctgaaaag gcagttcgtgaagctatcgtgtctatatggatcgatttcattttacattatccaattcct gaaagtgttttccatgaatatgttcaatattttgtcagcaatttacagtatccttactcc tttggaagacaagcatcggcaaatattctatccaagtggttactagaatcttccacttct cctatttggaaagaaaaggaaatctccctctttgttgcgacaagtgctcaaaaggccaat gaggaagatttgcaggttagacaaactttttccaatttgctaatcaccctattttcttgt atggatgaacaaagaagagtctatgtattggaaatgatagaagaatggtcatccaatgaa aagaaggagttgcagttgtttgccattgtcgttgtcgaatgtctttgtgatatttccaat ttgagaaagtcagagttggccctactgttgaaaataagtggaaagtgtttgcaatcgatg agtctccaattctcaagtttggaagctactgacgtccattttgcatttggagcattgttg tcttgtttggaacgaattttgaagcatcgaccagattggatagtacgagagtctttttta gatatttataagtgcatgtggcaatatgaattgtttgcaacgaatactttgtcagttcgt agaaaattggatagtcttattgcaagtttgtcattgtcgcttgagacactgaatggagta ctggaacgaaaagctgagcatttattgctactaaatgctgaagatactttcttggcaact ttattgaattgttgtattgaccatctgagtgtagatcctttggcagacgatactgcaaaa cttttatcagaaaatattaaccgactgctcaattggatggagaagtttcgttcgaatgat attcgaaagtccaccgtggaacatataagtctcgattgtttgatgaaattgtccaaaatt gcttcaggtcctaacctacctagtgatacattcggaacttttcgacgtcaaattgcttta gaacttgtaagggacagattgaaagtggctcattcaatatggtccaccaatgtgagcacg gaagaatcctatgcaagacctcttatcaggttaatgcttcgttgttggagagatttcggt gaaccacaaaggcaacaactgaatcggaagaggaaaaagaaatctttgaaaacgagcctg gatgaaacggaaacaattcaacttgtattacaggatattgaatccttaagaaggcagttg caacaagtgcaactgggcaaagtaaacaagtcactttctgaacgcaactgcatagagctt gtttctaaattggttgaaagaggactagtgcaagtgttgtatacacaagatggaagagag tacgtgacttttgaaagattgcaagaagaggtgctcgaagaacttaagtttcacggggga agactgaatctcatggaccttatttctttattgggtgttgatctaccttatattgaaagc gctactgagagaattttaaagagggataacacacttcgacttgaacaaggagttctttac agtcagacatactttgttagtgttgcccaagaagtagaagagcttcttcaaaccatgaat tttacaactattgcagatttatcttcaaggtttgatttgaggatggatatgatgagcgaa atagtacacaagtatttggatactattattcatggcaaaattgagaaaaacattatttac aatactggatatgttcgacagttggaagcaacagtatttggaactttgaaagctgcttgt ttacctgtttcattacatcatttggcaaagagaatacattcaagtgtggaatggataaga gagaatgcggaggtttggtgtgtacaaaagaagttggaaggatttttgcagggaaatggt gaaaataccttatttgtccctaatttctttgataggaaacgatttcagatcatcgaagag aattattcacgtaatcgatatgtcgattatcgttttctcaaattattttacattcaggaa ccccagaaatattgccaagagcattttggtgatggttttctgatttcaagttgtgctgtt catccagaaatgctgtcttttttagagtcatcttctttagatgctataagaaatggccat tggttggactggaatcttatattaccgatacattggaaaacagaagatcgccagattctg ttctccttaacgtcggagctgaaagcttgttgcctttttgaaccttcagagcaacttaat ctattaagaacaaaaggtgaagacaacaatgaaagtggtgtgggactcgtgatacgttgg agatggatatttagtattcagctgatacgaaagttttataagctcttttatgattggagt atgaaagaagcctcaagttcattgagtgaggaaaatatgctggcttccgatgagttgtac aagttgaatgccgaaacacagttacagcagagcaagaagaagagaaaggggaaaacaaag aaggaaactgtagaagataggtcaaccaatgagacagtgatttccaaactgagtttttca ctggagcactgtttgcactcgctgcgacaatactcagaggtggaaccaatttttgagttc gatgctttgggaaatacaagtgaggaagacttattgcgaattttggtggaagacatattt tctaaagcctgggaggagatacgaagagatgtcattcgagaggctagagaacatctcata cttgaaactaagacaaaggatgaaaagcttcgctcagaattggtgaagcttttgcggcga ctttatttctattctcggaatctgaagaaattctcggatcaaattgtcgaagaagaagaa agagacgttcttgaacaggttgatagctacatttgtcgcaccttgggtaccgaagttttg gaagcaactgtgacctatctaggttttactttaggctttagaattgaaggacaaactatt tcgtcaaaggaatggagaaaaatgcttgagaaacttcctccatatatgcaagaatctgta aaaaagttggaagcaatttttcgaaatgagaacaaacagaacaagttggagtcatttcgc ttggcagcttggttactggaattctatgatagatttaagaattcagaggttccagtggtg ccgagcttgtcctcgcaggaaacagaacatcttcgacacgaagaatttcaggaaatgaag actgctttggaaaatgcaatggaagcaccagatatcctctctaaagccttgaggattatg ttggtgaagcatttcgatgtttttataatctttccaggaaagagtattccaaaacttgta aaaattgttgaagcgagactacagtcatctcttaacaaccaattacaaaaagtcttgtta cgacttcatgaaattgcggtggatagtttgcgtgcaaagacggtaaaagacacaaaagaa cgacaaacacagagtgatataaactcagaggaagccatgtcagtcatcgaagaattcaaa accttgttaaatgatgaacactatttaaaagagtga

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