Galdieria sulphuraria: Gasu_52650
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Entry
Gasu_52650 CDS
T02926
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gasu_52650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_52650
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Gasu_52650
mRNA degradation factors
5'-3' decay
Lsm complex
Gasu_52650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
17086093
NCBI-ProteinID:
XP_005703683
UniProt:
M2XU21
LinkDB
All DBs
Position
Unknown
AA seq
153 aa
AA seq
DB search
MNDLSQWSISKDSNLDSPWIEGIPGCGIPGAGSLVEHIDRQILVLQRDGRYIVGLLRSYD
QYANLVLENTFERFVLNDSYCDEPLGVFIIRGENVALLGEVDGEKESQWLSHLHTVSLED
TKKTIRGKRQATKALLHSQPERVEWTFYDDAFF
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacttgtctcagtggtccatatccaaagactccaacttggatagtccttggata
gaaggaataccgggttgtggcatacctggggctggaagtcttgtagaacatatcgaccga
caaattcttgtactccaacgcgatggtcgctatatagtcggtttgcttcgttcttatgat
caatatgcgaatttggtattggaaaatacctttgaacgctttgtattgaacgattcctat
tgtgacgaacctttgggagtatttatcattcgaggagagaacgttgccctattaggagag
gtggatggagaaaaggaaagtcagtggctatcccatttgcatacggtttccttggaagat
accaaaaagactattcgaggaaaacgacaagcaacaaaggcacttttgcatagccagcca
gaacgagttgaatggactttctacgatgatgcctttttttag
DBGET
integrated database retrieval system
