Galdieria sulphuraria: Gasu_53550
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Entry
Gasu_53550 CDS
T02926
Name
(RefSeq) cleavage and polyadenylation specifity factor protein
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Gasu_53550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_53550
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_53550
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
Gasu_53550
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Gasu_53550
U7-dependent histone pre-mRNA processing factors
Gasu_53550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
CPSF73-100_C
Lactamase_B_6
Lactamase_B
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
ODP
Motif
Other DBs
NCBI-GeneID:
17085955
NCBI-ProteinID:
XP_005703535
UniProt:
M2WSZ8
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MGDPTSNVNDAVLNSQELLADETLQITPLGAGNEVGRSCVLLTYKNKTIMFDCGVHPAYS
GLASLPFFDEMDPRSIDLILITHFHLDHCAALPYLLEKTNCNPNARVFMTHPTKAIYKTL
LSDFVRVSSNEDVLYSEQDLSRTMKRIETLDYHQEMNWNGIRFWAYNAGHVLGAAMFLVE
IAGVRVLYTGDFSRQEDRHLKEAEIPPFPPDIIIVESTYGVQVHEPRKIREARFTQKVAE
IVRRGGRVLLPVFALGRAQELLLILEEYWEAHPDLQDIPIYYASSLAKRCMSVYQTYINM
MNDNIRKRYEVSNPFAFKYVLNVKNIQDFDDSGPCVFMASPGMLQSGLSRELCERWCTDR
RNGIILPGYSVEGTLAKHILSEPSTITRLDGKEVPLRCSVDYITFSAHSDFLQTSEFIDR
SRSGHIVLVHGEMTEMGRLRNALDLKYNKGQSVPNIRIYTPKNCQTVRLTFRAEKVAKAI
GEVAKRKPEDGASMSGILVKRDFNYTLMSPNELNTYTGLKVSRIQQRLVVPLKKPFSQLA
TELNHLLEGTVLDIDEETKRPQLDILGAIQVTLLEDGESASVEWCTNYATDILVENIVYL
CITHSITSAPVLAMDAVSVYRSKQSSSFEEEEKDEDFLYSALSMSRKLLEERFGALQVID
EDKSRFQVDSIDVIVDHRRGIVECEQHNIRERVELALRRIYTIMFPIPDYFCECCGC
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatccaacatccaacgtgaatgacgcagttctcaactcacaagaattgttagca
gacgaaactttgcaaataacacctttgggagcaggaaatgaagtgggtcggtcttgtgtc
ttacttacttacaagaacaagaccatcatgttcgattgtggtgttcatcccgcctattct
ggtttagcttcacttcctttctttgatgaaatggacccacgttccatcgaccttatttta
ataactcactttcatttggatcactgcgcagcgttgccttatctgttggaaaagaccaac
tgtaatccaaacgcccgagtattcatgacgcatcctaccaaagccatttacaaaacactg
ttgagtgactttgttcgagtaagttccaacgaagacgttctctattccgaacaagattta
tcgagaaccatgaaaagaatcgaaacccttgattatcatcaagaaatgaactggaacggt
attcgtttttgggcgtataacgcgggacatgtattaggagctgccatgttcctagtagaa
attgctggagttcgagtcttatatacgggagacttttctagacaagaagatagacatttg
aaagaagcagagataccaccatttcctccagatattataatagtagaaagtacatatggg
gttcaagtacatgaaccacgaaagattagagaagctcgatttacacaaaaagtagccgaa
attgttcgaagaggtggcagagtattgcttccagtatttgctttgggacgtgctcaagag
ttgttgttgattttggaggagtattgggaagctcatccggatttacaagatattcctatt
tattatgcttcttctttagctaagagatgtatgtcggtatatcaaacatatatcaatatg
atgaacgataatataaggaaacgttacgaagtctccaatccttttgcattcaaatatgta
ttgaatgtaaagaacattcaagattttgatgattcgggtccttgtgtgtttatggcatct
cctggaatgttacaaagtggtctttccagagaactatgtgaaagatggtgtacggataga
agaaacggaatcatattgcctggttactcagttgaaggaactttggccaaacatatatta
tctgaaccttccactataactcgtttggatggaaaggaagtaccattacgttgtagtgtc
gattatattacattttctgctcattctgactttcttcaaacaagcgaatttatcgatcgt
tcgcgttcaggtcatattgttttggtacatggcgaaatgactgaaatgggaaggcttcga
aatgctttggacttgaaatacaacaaaggacaaagtgttccgaatattcgtatctatact
cctaagaattgtcaaacggttcgcctcacttttcgagcagaaaaagttgccaaagcgatt
ggagaagtagcgaaacggaaacctgaagatggtgctagtatgtcaggtattttggtaaag
cgagactttaactatactttgatgagtcctaatgagttgaacacttatactggtttgaaa
gtgagtcgaatacaacagcgtttggttgttccattaaagaaaccattttctcaacttgct
actgaattgaatcacttattggaaggcacagtattggatatagatgaagaaacgaaaaga
cctcaattggatattttgggagccattcaagtgactcttttagaagatggagaatcggca
tctgtggaatggtgtaccaattatgccaccgatatattggtggagaatattgtctatctt
tgtataacccattcgataacttcagcgcctgtattggccatggatgctgtttctgtatat
cgcagtaaacagtcttcatcgtttgaagaagaggaaaaagatgaagactttctatactct
gctttatcgatgagtaggaaattgttagaagaacgttttggtgcattgcaagtgatagac
gaagacaagtcccgttttcaagtggatagcatagatgttatcgtagatcatcgacgtggc
attgtggaatgtgaacagcacaacatcagagagagagtagagttggctttaagaagaatt
tacactatcatgtttcctattcctgattacttttgtgaatgttgtggttgttga
DBGET
integrated database retrieval system
