Galdieria sulphuraria: Gasu_53950
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Entry
Gasu_53950 CDS
T02926
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03420
Nucleotide excision repair
gsl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Gasu_53950
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_53950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsl04121
]
Gasu_53950
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_53950
Ubiquitin system [BR:
gsl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
Gasu_53950
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
Gasu_53950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RIG_1st
Beta-prop_DCAF12
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
17085997
NCBI-ProteinID:
XP_005703581
UniProt:
M2VV24
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MKNEMMSANLLDYLKESSHTPHRSIFFDKFQVGYKLHCLDEVVVEKEQDALATVTAVDID
RAEGRYILAGESDGSIYLYDLFPYFYSEEKNGITLPRLCQSRDRQMNRLGSVSCLRWYTE
DNGMFFSLQYLIQQSRISIWDTNLFTEEQVIEYQDMPIYQLTPCPAGAMHSLLALGTNKK
VLLLDLRVGQRAVQQLGGWDSGVVCLEWCPQVDYCLATGTLNGDLSLIDWRKPKHNNRLV
VMNPYRSSCSNTSQPVLIQPMNQGIESLQRRLSWSPSSTLHFWSKSCYQQIIGCKRKEKM
DKVVEMKPLDGLSKQSEMLQHSQEIASHRAHSCSVQSICFLWNSRYLSSLDREGTVQIWD
TLTGCLEHSLTCSCLPNKRKRKNAFQWISLGWDNKTLIYALDRNLYSFDAFHGNHITTIQ
TIGSAITALTSHPWEPLWICGSRNGELIFFGVEDSIYLQKQLPLGVSFCTQK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgaaatgatgtctgcaaatctgttggactacttaaaagaatcttctcatact
cctcatcgttctattttctttgacaagtttcaagttggttataaattgcactgtttggac
gaggttgtggttgagaaagaacaggatgctcttgccactgtcactgcagtggatatcgat
cgagcagaaggtcgatatattcttgcaggagagagtgatggttcaatttatttatatgac
ctatttccttatttttattcggaggagaagaatggtattacacttcctcgtctatgtcaa
tccagagatagacaaatgaatagacttggcagtgtttcttgtttacgttggtatactgaa
gacaatggaatgtttttctctcttcaatacttgattcaacaaagtagaatttccatttgg
gatactaacttgtttactgaggaacaagttattgaatatcaggatatgccaatctatcaa
ttgacaccttgtcctgcaggtgctatgcactcactgttggctttaggtacgaataaaaag
gtattgttattagatttaagagttggtcaaagagcagttcagcaattgggaggttgggat
agtggagttgtttgcctagaatggtgtcctcaggtcgactattgtttggctacggggact
ttgaatggcgacttgagtttaattgattggagaaagcctaaacataataatcgcttggtt
gttatgaatccttatcgttcttcttgttcaaatacgagtcaacctgtgcttatccaaccc
atgaatcaaggcattgaaagtctacaaagaagactgagttggtctccatcatctacgctt
catttttggtccaagtcttgttatcagcagatcattggatgcaagagaaaagagaaaatg
gataaagttgtggaaatgaagccattggatggactatcgaagcaaagtgaaatgctccaa
cactctcaagagattgctagtcatcgtgctcattcatgttctgtccaatccatttgtttt
ttgtggaatagtcgatatcttagttctttggatagagaaggcactgttcaaatatgggat
acgttaactggatgtttagaacattcgttaacttgcagttgtcttccaaacaaacgcaaa
aggaaaaacgcatttcagtggatttcattgggttgggataacaaaactttgatatatgct
ttggatagaaatttgtattcctttgatgcttttcatgggaatcatataactacgatacaa
acaataggcagtgcaataactgctttaacttcccatccttgggaacctttatggatatgt
ggttcaagaaatggtgaattgatattttttggagttgaagatagcatttatcttcaaaag
caattgcctttaggagtctcattttgtacacaaaaataa
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