Galdieria sulphuraria: Gasu_55150
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Entry
Gasu_55150 CDS
T02926
Name
(RefSeq) small nuclear ribonucleoprotein family protein / snRNP family protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Gasu_55150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsl03041
]
Gasu_55150
Spliceosome [BR:
gsl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Gasu_55150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
SIMPL
DUF5335
Motif
Other DBs
NCBI-GeneID:
17085890
NCBI-ProteinID:
XP_005703465
UniProt:
M2WSU4
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MDTKDAPSGESFNRQRKKRSRFTDAPDDQGDNNKLELVENGSTFDTKPSQKETPEERIAR
LQTRIAAKMKASKVSLSENSLSQDPADAQRKQQLEEAAHRARMLAEKYAQTYGYNLQSSG
EVDSSVSSGNISKPLNSTPGETVRGLSLEKIPTKPVSTLKLNEETYKQNRLKRVLKVDKS
DFIETDPRKNPYYDPRVKASNNRLFKKSLEFLPEGFYQEKAERMREKAEADAMRAEMRRQ
AALASEAGENVAAALLLTEQKYFEDPPDVEWWDIPFLSNETYEDIVSGQIRLERISHYIE
HPVPLRTPRDRKQTPVMPLMLTEKERKRLRHQQRVERAREEQMMIQMGLKAPPPPKVKLS
NMMRVFGNEAVQDPTKVEAQVRAQMEQRRQEHEAANAARALTAEEKKEKREKKINQDRDR
FGVWVAVFRVISLQKPQHRFKIDRNAQELRLSGCCIIFRDCNVIVVEGSFKSIQKYKKLC
LRRIKWTEEDQDEEKLTGNDMTYPMEEEISDTKKSNCCVLIWEGAVMRPAFRDFRFATIP
TEEAVRSYFEKHRVEHYFDMAITYPIHDLELINQQTKQALNI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggatactaaagacgcaccatctggagagtcttttaataggcaaagaaagaagcgctcc
aggtttacagacgctcctgacgaccaaggtgacaataataagttagaactggtggaaaat
ggctcaacttttgacaccaagccatctcaaaaggaaacaccggaagagaggattgcaaga
ctacagacaaggattgcggcaaagatgaaagcttctaaagtttcgctttccgaaaattcc
ctatcccaagaccccgcagatgcacaaaggaaacaacagctggaagaggcagcacatagg
gctcgaatgttggctgaaaaatatgcacaaacttatggatacaacttacaaagtagcggt
gaagttgactcttcggtgagcagtgggaatatttccaaaccattgaatagcacgccaggt
gaaactgtccgcgggctttcattggagaagatacccacaaagcctgtaagcactttgaaa
ctaaacgaagaaacttacaagcaaaatcgtctcaagcgagtgttgaaagtagacaagtca
gatttcattgagactgatccaagaaagaacccttattatgatccacgagtgaaagctagt
aataatcgcctttttaaaaagtcattggagtttttaccggagggtttttaccaagaaaag
gccgaacgtatgagagaaaaggcagaggctgacgctatgagagctgaaatgagacgtcaa
gcagcgttggcaagtgaagctggagagaatgtggctgcggctctgttattgactgaacaa
aaatattttgaggatcctccagatgtcgaatggtgggatattccttttctttccaatgaa
acttatgaagatattgttagcggacaaataagattggaacgaataagtcattatattgag
cacccggtacctttaagaacacctcgtgatcgtaagcagactcccgtgatgcctctaatg
cttacagaaaaggaaagaaagagattgagacatcagcaacgtgttgaacgtgctagagaa
gaacaaatgatgatacagatgggtttaaaggcacctccacctccaaaggtgaaattgagt
aacatgatgagagtttttggaaatgaagccgttcaggatcctacaaaagtggaagcacaa
gtccgagcacaaatggaacaacgtagacaggaacatgaggccgcaaatgctgctagagca
ttgacagcagaggagaagaaggaaaagagagagaaaaagataaatcaggatcgtgacaga
tttggtgtatgggtggcagtttttcgcgtcatttctttacaaaaacctcagcatcgattt
aaaatagatcggaatgcacaagaattacgtctatcgggatgctgtatcatttttagagat
tgcaatgtcattgttgtggaaggtagcttcaagtccattcagaagtataaaaagctatgt
ttgcgaagaataaagtggacagaggaagaccaagacgaagaaaagctgacggggaatgat
atgacgtatcctatggaagaagaaatatctgatacaaagaagtcgaattgttgtgtttta
atatgggaaggcgctgtgatgaggcctgcttttagggattttcgttttgctaccattcca
acagaagaagcagttcgttcatactttgaaaagcatcgagtagaacattattttgatatg
gccataacttatcctattcatgacttggaattgataaaccaacaaaccaaacaggctttg
aatatataa
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