KEGG   Galdieria sulphuraria: Gasu_55940
Entry
Gasu_55940        CDS       T02926                                 
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Gasu_55940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsl03041]
    Gasu_55940
Spliceosome [BR:gsl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    Gasu_55940
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    Gasu_55940
SSDB
Motif
Pfam: PRP38 HIND
Other DBs
NCBI-GeneID: 17085755
NCBI-ProteinID: XP_005703323
UniProt: M2XT21
LinkDB
Position
Unknown
AA seq 278 aa
MANRTDPLAIHAHGFDPQFLIDKITREKIYQCAYWKAECFGLTAETLVDKAAELTYVGGL
YGPLKKPTPFICLILKLLQLSPDKEIIHQYLQQKKFKYLTALAAFYWRLVGNGTDVYRWL
EPLYEDFRKLRIRRENKYELIHVDECIDELLQKEDVCDIKLPRLPNRNVLMEDRLLAPRK
SKLEQELEEELQQTDPAIEKQRLYSENEPREESRQPTEPKVYRSLRFRDLLVQASNRTKG
RNLMEQEIQRKLEESSEEARSLAEWNRLRKELGLQPLK
NT seq 837 nt   +upstreamnt  +downstreamnt
atggccaatcgtacggatccgttggctattcatgcacacggtttcgatccacagttcttg
atagataaaataacaagagaaaaaatataccaatgcgcttattggaaagcagaatgcttt
ggtttgactgcagaaacattggtagataaggctgcagaactaacttatgtgggtgggttg
tacggtccactgaagaaacccacaccctttatctgtctcatcttgaaacttttacaacta
agtcctgataaggaaatcattcaccaatatttgcaacaaaagaaattcaaatatctaact
gctttggcagctttctattggagacttgtgggaaacggaacggacgtgtaccgttggttg
gaaccactgtatgaagactttagaaaacttcgaattaggagagaaaataaatatgaactc
attcacgttgacgaatgtattgacgaactgcttcaaaaagaagacgtatgtgatataaaa
ttgcctcgattgcccaatcgaaacgtcctcatggaagatagactgcttgcaccaaggaag
agtaaactggaacaagaactggaagaagaattgcaacaaaccgacccagctatagagaag
caaaggttatactcagaaaacgaaccacgggaagaaagccggcaaccgacagagccaaaa
gtttatcggtctttgcgtttcagagacctactggttcaggcgagtaaccgcaccaagggt
cgtaatcttatggagcaagaaatacaacgcaagttggaagaatcttcggaagaagctagg
tctttagcagagtggaatcgacttcgcaaagaacttggtttgcaaccactcaagtga

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