Galdieria sulphuraria: Gasu_56060
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Entry
Gasu_56060 CDS
T02926
Name
(RefSeq) chromatin remodeling complex SWI/SNF component, Snf2
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_56060
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_56060
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
Gasu_56060
RSC complex
Gasu_56060
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
Gasu_56060
SWI/SNF complex
Gasu_56060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
HSA
Motif
Other DBs
NCBI-GeneID:
17085767
NCBI-ProteinID:
XP_005703337
UniProt:
M2XAC2
LinkDB
All DBs
Position
Unknown
AA seq
1502 aa
AA seq
DB search
MSGEKTKEKLSIQQVDGNILLRKEDFLDEDILFDSRGNFELPSFDALDEQLETFFNSGTL
NKTKKELNRQNYEEKELSLELEVDRNHSSASHFENSSGEFYAWKTNSAVENTNDKGDLTK
PQKVFSNTKSTVSKSCVVEKNAPPLEAQSHVTLDSDTSRKKTIPLNHRNEMSDYGYYSKN
SDPTGNSVFLENRPKTDERNELYYSDLYHPKRKREFIGEKLSSHSGISKETSNLRTSQTM
KLERNSSLSDGTTMHSNLNNLKRQKWILPQDFETSSLQQPDRKLVEAQKDLFRQEFSSMP
LKVSLQGSTSNVDVKAENSLPLQIVDSVMPVGHLSQTSKCNDVNKNDVKYLNESMQRQID
DTKRHSVNRSSILTSRLHRFPLKPKILFGVIELLKCQRKRNLPSEETKYFILMKLLKAHT
VPYPNSILTFRHLFALRVQYRIFYEMKRGGRLPEDTLNASRALTIGSGSIPQVEKMNNKS
KPPERNFTRQQVFVQSLPFPAEKLSSDLNITPLDSSFLRKEADRLVTTLSRRFANKLATE
ISSFKCNEDASVEDSKRWGAQKRTLRIQYSKANLVVLQRKLRRRVLEERRMAEEQGKLGS
KSRLRSFRALMKEAEKMERFMLKEMEAQEREKRKNFVSFLSSLMSHINNFRQYHKEYVHR
LRRSVARSVLRYHEDKARAVERAEKEAERRRIIALKENDEEGYVNLLRQTKNERLLQVLN
QTDEYLRHLGAVVKQQRDGTLNDGQHYLEKEETNKTDVLSRENCQTYYEIAHAIKEPITE
LPTILQGGTLKQYQIQGLQWLVSLYVNHLNGILADEMGLGKTIQAIALLAYLVEKKNNSG
PFLIVVPLSTLSNWELEFEKWAPSLHVVVFKGDRKQRKSLYDTVIQPLNFNVCLTTFEFV
SRGKNLLGKVEWNYLIVDEGHRMKNHESRITAILSQQFKSRSRLLMTGTPLQNSLSELWS
LLNFVLPNIFSSSETFESWFAAPFASIPGEKADLSEEETLLIIRRLHQVLRPFLLRRLKS
DVLRMGDQLPTKQEHVILCEISAWQKMVYRRILRGQKVVFTGLSGRRRHDFLSNPAMQLR
KMANHPYLFYEDYSEELMLGNRDSEELFRASGKFYMFDMLLQKFLRTGHRVLVFNQMTRV
IDLQERLLRFRGINFLRLDGSTKSEMRRNIVEEFNRSDTIYHVLLLTTRAGGLGVNLQSA
DTVIIFDSDWNPQMDLQAQDRAHRIGQDKEVLVLRIVAANTIEERILERASYKKDMEQKV
IRAGMFNETSKDSDRQALLRELLKDDEERSSEGHESRVPDLETINAMISRSDNEMEIFQQ
VDEERQIELNSRSPLMEPNEIPSWVIGDVNEEDDEDLGEWSLSKSDYLPKESESSYSFHS
VSSDDEISYQASEWEVHSAHRSKRDSYEFHQVSSEWCESNAKLRNAQSDNVSGTTCLLEP
DETCNENVVGRDDRESDYSDSYQKSISERASISIEGLNGSLCFTDDETYSGWFEEAELGQ
ET
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgaaaaaacgaaagaaaagctgtcaatccaacaagttgatgggaatatttta
ttaaggaaggaggactttcttgatgaagacatattatttgactcacgcggaaactttgag
ctaccctctttcgacgcactagatgaacagctggaaacttttttcaactcagggaccctt
aataagaccaagaaagagttgaacagacaaaattatgaagaaaaggagctttctttggaa
cttgaagtggaccgcaaccattccagtgcaagtcattttgagaattcttccggtgaattt
tatgcttggaaaacaaattctgcagtagaaaataccaatgataaaggggaccttacaaag
ccgcaaaaagttttctctaatacgaagagtaccgtatcgaagtcttgcgtagttgagaaa
aatgccccacctttagaggcacagtcacacgtgacgcttgacagtgacaccagcagaaaa
aagaccataccgttgaatcatagaaatgagatgtcagattatggttattattcgaaaaac
tccgacccaactgggaactctgtgtttttggaaaacagacccaagacggatgaaaggaat
gagctttactattcagacttgtatcaccccaaacggaaacgtgagtttattggtgagaaa
ctatcgtcacactctggtatatccaaagaaacctcaaatttacgaaccagtcagacaatg
aaactcgagaggaactcaagcttatcagatgggactactatgcatagcaatttgaacaac
ttgaagagacaaaaatggatattgcctcaggattttgaaacttcttctttgcaacaaccg
gataggaagttagtagaagcgcaaaaagacctttttcgtcaagaattcagttcgatgcct
cttaaagtatctcttcaaggaagcacctcaaacgttgatgtgaaagcagaaaattctcta
ccgttacaaattgtagactccgtaatgcctgtaggtcatttgtctcaaacttccaagtgc
aatgatgtaaataagaatgatgttaaatatctcaacgaaagtatgcagagacaaattgac
gatacgaagaggcattcagttaataggagttcgattttaacctccagacttcatcgtttc
cctttgaagcccaagatattgtttggagttatcgaattgttgaagtgccaaagaaaaagg
aatttaccttccgaagagacgaagtatttcatcttaatgaaacttctcaaagctcatact
gttccataccctaatagtattttgacctttagacatctctttgcgctccgtgtacagtat
cgaatattttacgaaatgaagagaggtggaagacttccagaagatactctaaatgcttca
cgtgcgttgacaattggtagcggttccattccgcaagttgagaagatgaacaacaagagc
aagcctccagaaaggaattttacgagacagcaagtttttgttcagtctctgccttttcct
gctgaaaagctttcttctgatctcaatataacgccgctcgatagctcctttttgagaaaa
gaagcggatagattggtaacgactctctccagaagattcgccaacaagttagcgacggaa
atttccagtttcaagtgtaacgaagatgcttctgtggaagattccaagcgttggggtgca
caaaaaaggactttgcgcatacaatattcaaaggcaaatctcgttgtcttacaacgaaaa
ctacgtcgacgagttttagaagagaggagaatggctgaggaacaaggcaagttaggttcc
aaatctagacttcgatcatttcgtgctcttatgaaggaagctgagaagatggaacgcttt
atgttgaaagaaatggaagctcaggaacgagagaaacggaagaattttgtgtctttcctt
tcatctctaatgagtcatataaacaattttcgacagtatcataaagaatatgttcatcgg
ttgaggagatcagttgctcgctcagttttgcgttatcatgaagacaaggctcgtgcagtt
gaaagggctgagaaggaagccgaacgtcgtcgaatcattgccttgaaagaaaacgatgaa
gaaggctatgtaaacctccttcgtcagacaaagaacgaaaggttactgcaggttcttaat
cagacagatgaatatttaaggcacttgggcgcagtagttaagcagcaaagggatggaact
ttgaatgatggtcagcattatcttgagaaggaagaaacaaacaaaacagacgtccttagt
agagaaaactgtcaaacatattatgaaattgctcatgccattaaagagccaataactgag
ttacctactattcttcaaggaggtactttgaagcaataccaaattcaagggcttcaatgg
ctggtttcattatatgtcaatcatctgaatggcattttagcagatgaaatgggattggga
aagactattcaagctattgcactattggcatatttggttgagaaaaagaacaatagtggt
ccgttccttatagttgttccactttcgacgctaagtaattgggaactggaattcgagaaa
tgggctccttctcttcatgtcgttgtattcaaaggtgaccgcaaacagagaaagtcactc
tatgacactgttatacaaccactaaactttaatgtttgtttaacaacatttgagtttgta
tcaaggggaaagaacttgcttggaaaggtagaatggaattatttgattgttgatgaaggt
catcgaatgaaaaaccatgagagtagaataacggcaatcttgagtcaacagtttaagagt
cgtagtagacttttgatgacaggaactcccttacagaactcgttgtcagagttgtggtcg
ttactgaactttgttctgccaaatattttttcgagcagtgaaacttttgaaagttggttt
gctgctccatttgcttctatacctggagaaaaggcagacttatcggaggaagaaacgttg
cttattattcgacggcttcatcaagttcttcgaccctttttgttgagacgtctcaagagt
gatgttcttcgtatgggtgatcagctgccaactaagcaggaacatgtcatcctttgtgag
atttccgcttggcagaaaatggtttatcgtcggatacttaggggacaaaaggttgtattt
actggcctttcaggaagaagaagacatgattttttatcaaaccctgcaatgcagttgcgg
aaaatggctaatcatccatatctcttttacgaagattattcggaggagttgatgttagga
aatagagattcggaggagcttttcagggcttcaggaaagttttatatgtttgacatgtta
ttacaaaaatttcttcgaacaggacatcgcgtgttggtttttaatcaaatgacaagagtg
attgacttacaagagcgacttttacgtttcagaggcataaactttctaagacttgatggt
tcaacaaagtctgaaatgcgtcgtaatattgttgaagagtttaatcgtagtgatactatt
taccatgtattactgcttaccactcgagcaggtggtttaggtgttaatttacagagcgca
gatactgtgattatttttgattcagattggaatcctcaaatggacttgcaagcacaggac
cgtgcacatcgcattggtcaagataaggaagttcttgttttacgaattgttgctgcgaat
actatcgaagaacgtatacttgagcgggcttcatataagaaggatatggaacagaaagtc
attcgagctggaatgttcaatgaaacctccaaggattctgatcgtcaagcattattgcga
gagcttttgaaagatgatgaagaacgatctagtgaaggacatgaaagtcgagttccggat
ctggagaccattaatgctatgatttcgaggtcggacaatgaaatggaaatatttcaacaa
gttgatgaagagagacaaatcgaattgaatagtcgatctcctttgatggaaccgaatgaa
attccttcatgggtgattggagacgtgaatgaagaggacgacgaagacttgggcgaatgg
agtctttcaaagtccgactatttgccaaaggaatctgagtcttcatatagttttcattcc
gtttctagtgacgatgagatttcctatcaagcaagtgaatgggaagttcattcagcacat
agaagcaagcgagattcatatgaatttcatcaagtctcttcagaatggtgtgaaagcaat
gcaaagttgaggaatgcacaatccgacaatgtttctggtaccacgtgtttattggaacct
gatgaaacctgtaatgaaaatgttgtaggaagagatgatagagagtctgactatagtgat
agttatcaaaaatcgatttcagagagagcctcgataagcatagaaggtttaaatggaagt
ctttgttttacagatgatgaaacttattcaggctggtttgaggaagcagaacttggacaa
gagacataa
DBGET
integrated database retrieval system
