Galdieria sulphuraria: Gasu_56480
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Entry
Gasu_56480 CDS
T02926
Name
(RefSeq) nucleoporin interacting component family protein
KO
K14309
nuclear pore complex protein Nup93
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Gasu_56480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_56480
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Gasu_56480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
PaREP1
Motif
Other DBs
NCBI-GeneID:
17085705
NCBI-ProteinID:
XP_005703271
UniProt:
M2VU83
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MTETNFAELLQKSLFLASRAEGTQRKQALDNTPLLPRGISQVDKEAKEMLARASRTGGTP
EIDPSSIRLFSELNFDAESLGKEVRTFNAVENLLPPPETSLSSDLDSYILEQHEDAIFST
LEDSQAVVSEELRRKLDSAIETMWEKEKDKFLKQLSRHVSASFSESKDSTSNATSASLWS
TPLDQTRTTPSSHSSTILGEHKEYTEGVDLSAEFTNIVRNILERRVLDPVAQKLGFSSLS
NNLEDSKVSSSSSLPIAQQFAKAISSHQHALKYFAFIFEAISWICGERHVDFDGSYIRDS
HLKEGCVDLLDSTQLKRSLQGSLRAMEEKFKEGRLVATIRSHPEQALRGGKPGLVEDIRA
YLRVVFHNDFHSLAEDTQFLHRLPLWPQIFLALRCGDVHSAVKIAEEANAQLTANGLHFY
EFIQEFFSNPDRCLSEDSLVQLSQEYSLVARRSSDAFLRVCYILIARCNPNIDEKWKLQE
SDYSIVLSSIEDYLWFHLSLVRLDEKQMPLSLQAYRLQLIDVQQEIQEFGASYFDPKGER
PLFYTMILTLSLQFAKAVDYLVKCDGFLFYGLHIGLILYYYGILHNEKEWKSIIGNHPNL
SNQYRKQIQVLLEPYDFDRCLWSYVQSIAKSRPLDAACYLYILRDTSSRMYYLKELILQS
GEYESLLGFIGPDGARRRGFIDQLERCLPEEDRNVQVSLVLATDSAIEAAERGDIQAAVR
LYDIAEEYDRLVAILAKTLSAELIHSRSSLRSWLVEESRRYLKLLSEKFISETNTSKWIS
TLKLLLSLVEFIDLVQQQKYEEAWTCICNLNILPTNERDVVAKSSQWQSVSDESDQLVAE
KLSQVIVRAMDCLVALYQRTKESQRHSERSQLSPSTLSSHKLKENTESRY
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacaaactttgcagaactcctacaaaagtcacttttcctagcatctcgagca
gaaggaacgcagagaaaacaagctctagacaacacacctttgttaccgagaggtatctct
caagtggataaggaagcaaaggaaatgttggcaagagccagccgcaccggaggaacacca
gaaatagacccaagttctatacgattgttttctgagctcaattttgacgcagagtcactc
gggaaagaagtccgaacgttcaacgctgtagaaaaccttttgccgccacccgaaacaagt
ttgagcagtgacttggattcatatattcttgaacaacatgaagacgccattttctcaacg
ttggaggattctcaggcagttgtcagcgaagaacttcgaaggaagcttgattcagcaatt
gaaacaatgtgggaaaaggagaaagacaagttcttaaaacagctttcgaggcacgtctca
gcctcgttcagtgagtcgaaggactcgacttcaaacgccacaagtgcctctctatggagc
actccactagatcaaacgcgaaccacgcctagtagtcattctagtacaatattaggagaa
cataaagagtatactgagggagtcgatctgagtgctgaatttacgaatattgtgaggaat
attttagaaagacgagtgttagatcccgtggcgcagaaattgggtttttcttctttgtca
aataacttggaagattcaaaagtctcaagttcatcttcattgcctattgcacaacaattc
gcgaaggcgatttccagtcatcaacatgctttgaaatattttgctttcattttcgaggca
atatcttggatttgtggtgaacgtcatgtagattttgacggttcttatattcgcgattct
catttaaaagaaggatgtgtagatttgctggattcaactcagctgaaacggtcattacaa
ggttcacttcgtgctatggaagagaaatttaaggaaggtagactagtagcaactattcgt
tcgcaccctgaacaggcactacgtggaggtaaacctggtcttgtggaggacattcgagct
tatttaagagtcgtctttcataatgactttcattcacttgccgaagatactcaatttctt
catcgccttccactttggccacaaatattcttggcgttacgttgtggagatgttcattct
gcagtaaagattgcggaagaggcaaatgcacaactgactgcaaatgggcttcatttttat
gagtttatacaagagtttttttccaatcctgatcgttgtctttctgaagactcgttggtt
caactttctcaagaatattctctagttgctcgtagaagtagcgatgcgtttttgagggtt
tgttatattttgattgctcgttgcaatcccaatattgatgaaaagtggaaacttcaagaa
agcgactattcgattgttttgagttcgattgaagactatctctggttccacctttcactt
gtacgactggatgagaagcagatgcctttatcccttcaagcttatcgtctgcagcttata
gacgttcaacaagaaatacaagaatttggtgcttcgtattttgatccaaaaggggaacga
ccattattttatacaatgatattgacgctttccttgcagtttgcaaaggctgtcgattac
cttgtcaagtgtgatggctttctattctatggtttgcatattggattgatcttgtattat
tatggcattttacacaacgagaaggaatggaaaagcattatcggaaaccaccccaatctt
tctaatcagtatagaaagcaaatacaagttctactggaaccttacgattttgatagatgt
ttgtggtcctatgttcaaagtattgccaagtctcgtccgttggatgctgcctgttatctt
tatattttaagggatacatctagcagaatgtactatttgaaagagcttattttacagagt
ggagaatacgaatccttgttgggttttatcgggcctgatggtgctcgaagacgtggtttt
attgaccaactagaacgctgtttgcctgaagaggaccgtaatgttcaagtatctttagta
ctggcgacagattctgctattgaggccgcagaaaggggtgacattcaggcagctgttcgt
ctatatgatattgcggaagagtatgatagactcgtagccattttggcgaaaacattgagt
gcagaactcattcattcccgttcttctcttcgttcatggttagtggaagaatctagacga
tatttaaaactactttcggagaagttcatatcagaaaccaatacttcaaagtggatatct
acattgaaattgttgttgtcactcgtagagtttatagatcttgtacaacaacaaaagtac
gaagaagcatggacttgtatttgtaatttgaacattttgcccacgaatgaacgagacgta
gttgccaagagtagccagtggcagtctgtttcggacgaatcggatcaactagtcgcggaa
aaactttcgcaagtcattgttcgagccatggactgtttggttgctctttatcaaaggacc
aaagagtctcagcgacattcagaacgctctcaattgtcaccctccactctttcatctcac
aagttgaaagagaatacagagtccagatattag
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