Galdieria sulphuraria: Gasu_56620
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Entry
Gasu_56620 CDS
T02926
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_56620
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_56620
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
Helicases
Gasu_56620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
17085721
NCBI-ProteinID:
XP_005703285
UniProt:
M2WSD1
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MITSLRRAKDMVSSFEELGLGQWIVETCKALNIMKPTPCQVACIPQTLNGKDIIGSSETG
TGKTMSFVLPIVDKLSVDPCGVFAIVLTPTRELAFQIYDQFKAIGNPMSIRVAVVVGGLE
SIRQATELENRPHVVVATPGRLADLFTIEDSVERFHLHSIRFLVLDEADRLLEDGFASSL
STILDVLPVNRQTLVYSATMNDKMEQLSKTCRSECFIYTSSSSRYSQVRELEQFYLLIPF
QMKTCYLAYLLLYGFPSFSCIIFTGSCKRCQHLFLTLEYLGLNVGVLHSKMKQMERLKAI
HNIQRGTIRILICTDVASRGLDIPQVELVVNYHIPSKPSTYIHRVGRTARAGNRGKAISL
VSQFEVEIFRNIERRLERELVEFGHCKEKEVLKILTDVLKAERKAKLKMLGMKV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatcactaagaagagcaaaggatatggtttctagttttgaagagttgggactt
ggacaatggattgtagaaacttgtaaagcattgaatattatgaaaccaacaccttgccaa
gtagcttgtattccacaaacgttgaatggcaaggacatcattgggtcctctgagacagga
acgggtaaaaccatgtcatttgtattgcccatcgtcgataagcttagtgtggatccttgt
ggcgtttttgccatagttctaactccaacaagagagttagcttttcagatatatgaccag
ttcaaagctataggtaaccctatgtctattagagttgctgtagtggttggcggcctggaa
tcgatacgacaagctacggagttggagaatagaccacatgttgtggtagcaactcccggc
agactagcagatttatttacaatcgaggatagtgttgaaagattccatttgcattccata
cgatttcttgtgttggatgaagctgatcgtttattagaggacggctttgcctcgtctctc
tctacaattctagatgtcttacctgtaaatagacaaactttggtttattctgcaacaatg
aacgacaaaatggaacaactttcaaaaacttgtcgaagcgaatgttttatatacacaagt
tcctcttcgagatactcgcaagttagggaattggaacaattctacttgttgatacctttt
cagatgaaaacttgctatctagcttatttacttttgtatggatttccttcattttcgtgc
ataatattcactggttcttgtaaaagatgtcaacatctttttctgacgttggaatatctt
ggtttgaatgttggagtgcttcattcgaagatgaaacaaatggaacgattaaaggccata
cataacattcaaagaggaacaatcagaatacttatttgtactgatgttgccagtcgtgga
ttagatataccacaagttgaacttgttgtgaattatcatattccatccaagccaagcacc
tatatacatcgtgtagggagaactgcaagagccggtaatcgaggcaaggcaattagtctt
gtctcacagtttgaagtagaaatatttcgtaacatagaacgaagacttgaacgtgaactt
gtagaatttggtcattgcaaagaaaaggaagttttgaaaatattaactgatgttctaaaa
gcagaaagaaaggcgaaattgaaaatgttgggtatgaaagtctag
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