Galdieria sulphuraria: Gasu_56970
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Entry
Gasu_56970 CDS
T02926
Name
(RefSeq) ubiquitin-protein ligase (Cullin)
KO
K10609
cullin 4
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03420
Nucleotide excision repair
gsl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Gasu_56970
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_56970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsl04121
]
Gasu_56970
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_56970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsl04147
]
Gasu_56970
Ubiquitin system [BR:
gsl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
Gasu_56970
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
Gasu_56970
TCR (transcription coupled repair) factors
Cul4-CSA complex
Gasu_56970
Exosome [BR:
gsl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Gasu_56970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
DUF6845
Motif
Other DBs
NCBI-GeneID:
17085649
NCBI-ProteinID:
XP_005703211
UniProt:
M2VU16
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MPYSPARRSTRRSSSGTQRKRGNSLEGKTNQAENSSNRLEQTSCNKKPKKSSKKGEDPSQ
NLLTMFNRENSPQTKNDGEVMISNGKLQQQSNQREPIHQSFSTPQKSSTKLVIRPLASAP
AVSKNFAEEIWINYLKQAVKAIQNATKVVFSYEELYRKVEDVCLLKWGSFLFEKLQEEVE
QHVAIQINSLQGYSHESETFLYGVSKVWEEHCNQMKLIRSIFLFLDRSFVLHNAPVRSLW
DMGLKVFRKYLQQNSEVEKKTVQSTIALITAERKGESIPQDLVKDMIRMFTALEIYGESF
EKAFLDASSEYYNNEGNVLLQQYDIYTYLKHVEIRLSEEVNRVVHYLDRITKAPLIQLVE
NCLLESHTVEILDKGFDNMMEENRQEDLARLYRLLARVHQLDQVKKYLGIYTKSTGARII
QDPEKDNELVQLILDMKDKVDSIVSNCFDKNETFQYAVKESFESFVNMRQNKPAELTAKY
IDQILRTGNKGYTEEELEGTLDKVLQFFRFIHGKDVFEAFYKKDLAKRLLLGKSASLDLE
KTMISKLKAECGAGFTSKLEGMFKDIDLSQDIMKAFYESLEWKHCGNEVDLSVVVLTSSY
WPQSTCGDVKLSKELLKLQNAFSRFYLNKYAGRKLTWNHSNSMCTIRANFPKGQKTISLS
LYQTLVLLLFNETDALTLREIHEGIGLEMKELKRTLQSLACGKIRVLRKEPMSREVEEDD
IFYFNKDFQDKRYRIKINQIQVKETPEENQQTTERVVQDRQYQIDAAIVRIMKTRKSLTH
SQLMSELYEQLKFPYQPADLKKRIESLIDREYLERDSDTPQLYRYLA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccttattcgcctgctaggcgttccacacgaagaagttcgtcagggacgcaaaggaag
agaggcaactcgttggagggaaaaacaaaccaggcggaaaattcctccaacagactagag
caaacaagttgtaacaaaaaaccaaaaaagtcatccaagaaaggagaagacccttctcaa
aatttattgactatgttcaacagagaaaattccccacagaccaagaatgacggtgaagtg
atgataagcaacggcaaactacaacaacaaagcaaccaaagggaacccattcaccagtct
ttttcaactccacaaaagtcttcaaccaaactagtgatacgtccactggcttcggcgcct
gcagtttccaaaaattttgctgaagaaatatggataaactacctcaaacaagcagtaaaa
gccatccaaaacgctaccaaagtggtattctcttatgaagagttgtatagaaaggttgaa
gacgtctgtttgctcaaatggggctcttttctttttgaaaaacttcaggaagaagtggaa
caacacgtggccatacaaatcaactctcttcaaggttactctcacgagtcggaaactttt
ctttatggagtaagcaaagtatgggaggaacactgtaaccaaatgaaactcataagaagt
atatttctatttttggatcgatcctttgtcctacacaacgctccagtaagatcactttgg
gatatgggcctgaaagtatttagaaaatatttgcaacaaaactcagaagtagaaaagaaa
accgtacaatccaccattgctttgataacagctgaacgtaagggagaaagtattccgcag
gatcttgtaaaggatatgatcagaatgttcacagctttggaaatttatggagaatccttc
gaaaaggcttttctcgatgctagcagtgaatattataacaatgaaggaaatgtgttgctg
caacaatatgatatatacacttacttgaaacacgtagagattcgtctttctgaagaagtg
aacagagtagtccattatttggatagaattacgaaagcacctttgattcaacttgtagaa
aactgtttattggagtcgcacactgtggagattttggacaaaggctttgacaatatgatg
gaagaaaatcgacaagaagacttggcacgtctctaccgactacttgcccgagtccatcaa
ctggaccaagttaaaaagtatcttggcatttatactaaaagtacaggtgctagaatcatt
caggatcctgaaaaggataatgagcttgtacaacttatattggatatgaaggataaggta
gactccattgtatctaattgttttgacaagaacgagacgtttcaatacgcagtgaaagaa
tccttcgaatccttcgttaacatgcgtcagaataagccagcagagttgactgcaaaatat
atcgatcaaatactacgaacaggtaataagggctatacagaagaggaacttgaggggaca
ttagacaaggttcttcagttctttcgttttattcatggtaaagatgtctttgaagccttt
tataagaaagacttggcaaagcgtctattattaggcaaatcggcttccttagatttggaa
aagacaatgatttccaagttgaaagcagaatgtggagcaggttttaccagtaaactggaa
ggaatgttcaaggacattgacttatctcaggacattatgaaggccttttatgaaagtttg
gaatggaaacattgtggcaatgaagtggatttaagtgttgtagttttgacttcgagttat
tggccacaaagcacttgtggggatgtgaaactttcgaaagagcttttaaaactacaaaat
gctttttcgcgattctatttgaacaaatatgccggaagaaaattgacttggaaccacagc
aatagtatgtgtactattagagctaattttccgaaaggtcaaaaaacaatttcactttct
ctctatcagacattagtgttgttattatttaacgagactgatgctttgactttaagggag
atacatgaaggaattggtttggagatgaaagagttgaagaggacactacagtctttggcg
tgtgggaagattcgggtgctgagaaaggagccaatgagtcgagaagtggaagaagatgat
attttttatttcaacaaagactttcaagataaacgttatcgaatcaagattaaccaaatt
caagtgaaggaaactccggaagagaatcagcaaacgacagagcgtgttgtacaagaccgt
cagtatcagattgatgctgccattgttcgcattatgaaaacaagaaagtctttgacgcac
agtcaattgatgtcagaactttatgagcagctcaagtttccttatcaaccagcagatttg
aaaaagagaatagaaagtctcatcgatagagaatatttagaacgtgattcggatactcct
caactgtatagatacttagcataa
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