Galdieria sulphuraria: Gasu_58920
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Entry
Gasu_58920 CDS
T02926
Name
(RefSeq) eukaryotic translation initiation factor eIF-4A
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03013
Nucleocytoplasmic transport
gsl03015
mRNA surveillance pathway
gsl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Gasu_58920
09122 Translation
03013 Nucleocytoplasmic transport
Gasu_58920
03015 mRNA surveillance pathway
Gasu_58920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_58920
03041 Spliceosome [BR:
gsl03041
]
Gasu_58920
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_58920
03012 Translation factors [BR:
gsl03012
]
Gasu_58920
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_58920
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Gasu_58920
mRNA cycle factors
Stress granule specific factors
Gasu_58920
Spliceosome [BR:
gsl03041
]
Complex C
Other components
EJC/TREX
Gasu_58920
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
Helicases
Gasu_58920
Translation factors [BR:
gsl03012
]
Eukaryotic type
Initiation factors
eIF-4
Gasu_58920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
NACHT
AAA_22
PhoH
AAA
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
17085459
NCBI-ProteinID:
XP_005703009
UniProt:
M2XSU4
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSSYRGRRGRGYRDRELEFETSREVKAIPSFEELGLKKELLRGIYSYGFERPSAIQQRAL
APALKGRDVIAQAQSGTGKTAMLSVIALNSVDIKTREVQVLILSPTRELAQQTQHTLLSL
GEFMNVQCHACIGGKNLGEDIRTLDYGVHVVSGTPGRVFDMIQRRNLRTRSLRLFIIDEA
DEMLSRGFKEQIYEVYRHLPPSIQVILVSATLPHDVLEMTSKFMTDPVRILVKRDELTLE
GIKQFFVAVEKEEWKFDTLCDLYETLTITQAVIFCNSKRKVDWLTSKLRENNFTVSSMHG
DMKQSERDAVMAEFRSGKSRVLIATDIWARGIDVQQVSLVINYDIPLNRENYIHRIGRSG
RFGRRGVAINFVTNEDVAMLRDIEQFYSTQIDEMPMNVADLV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttaccggggaagacgtggacgaggttatcgtgatcgcgaattggagtttgaa
acaagtagagaagtaaaggcaattccttcttttgaagagttgggacttaagaaggaattg
cttcgtggcatttacagttatggttttgagagaccttcggccattcaacaaagagctttg
gcacctgctttgaaaggtagggatgtaatagctcaagctcaatccggcaccggcaaaacc
gccatgttatccgtaattgctctgaacagtgttgatattaagacacgagaggtgcaagta
ctgattctttcccctacacgtgagttggcacagcagactcaacacacactcttgtctctt
ggagaatttatgaacgtccagtgtcatgcttgtattggagggaagaatctaggagaggac
attcgcacgttggattatggtgttcacgtcgtttccggtactcctgggagagttttcgac
atgatccagcgtcgaaatttgcgtactcggtcgcttcgtttatttattattgacgaagcc
gatgaaatgctgtcgagagggtttaaagaacaaatctatgaagtatatcgtcatttacct
ccatcgattcaagttattctagtttctgctacgttgccacacgacgttttagagatgacc
tcaaagtttatgacggaccctgtcaggatattggtaaagcgggatgagttgaccttggaa
ggtatcaagcaattttttgtggctgttgagaaggaggaatggaagtttgacacattatgt
gacttgtacgaaacacttacaatcacccaagccgttattttctgcaactcgaagcgcaaa
gtggactggctgacgtcaaaattacgagagaacaactttacggtttcgtctatgcatgga
gatatgaaacagagtgaaagagacgctgttatggccgagtttcgtagtggcaagtcaaga
gttcttatagctacagatatttgggcgagaggtatcgacgtgcaacaagtttctttggta
atcaattatgatattccattaaacagagaaaactatattcaccgaattggtcggtcgggg
cgctttggacgtcgaggagttgctattaatttcgttacgaatgaagatgttgctatgttg
agagatatcgaacagttttatagtactcaaatcgatgaaatgccaatgaacgttgctgat
ttagtataa
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integrated database retrieval system
