Galdieria sulphuraria: Gasu_58990
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Entry
Gasu_58990 CDS
T02926
Name
(RefSeq) tRNA-intron endonuclease
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsl03016
]
Gasu_58990
Enzymes [BR:
gsl01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Gasu_58990
Transfer RNA biogenesis [BR:
gsl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
Gasu_58990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
17085466
NCBI-ProteinID:
XP_005703016
UniProt:
M2VTG9
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MKSPRDDDDEPIRVFVEKKAKVFLIWNLEDVKRLRTKHRIVGELVGTLVGHKSQNDYLGL
PLQLSVEEVSLGCLYGFLELVTWKDSREKQVSPQLVPERLKKKKRNYSEMSVSDSPLEEP
AENLGASQKFRRVIGHFCKNAVSNLFHSLQSLWDWKRTWHNNISRKSLKQTYLEGEFVPV
VQTDSTGRGTQSLDWNPKEVILVEEPKDIDSVVVLFRKGMRYPDFLSSFGFHSFASRRLT
VFHDLWKRGFYISSGVKFGADFLAYADDPILFHASLAVVVAEQDSKISPRDLVAFGRLGV
STKKRATLAYIDSVKNGEGFPQVVYISIRWNESLP
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtcctcgtgacgatgacgacgaacctattcgagtgtttgtagaaaagaaagcc
aaggtctttttgatatggaatttagaagatgtgaaacgattacgaacgaagcatcgtata
gttggagagcttgttggcacacttgttggtcataaaagtcaaaacgactatttaggtcta
ccacttcagctctctgtagaagaagtttctctgggttgtttatatggttttttggaattg
gtcacttggaaagacagtcgggagaagcaagtttctcctcagttggttcctgaaagattg
aagaagaagaagagaaactattctgagatgagcgtatccgattcgcctttggaagaacct
gcagaaaacttgggtgcttcgcaaaagttccgacgtgttattggccacttttgtaagaac
gctgtttcaaatttgttccactctttacagtctctttgggattggaaaagaacttggcat
aataacatatctcgaaaaagtctaaaacaaacttatctcgagggagagtttgttccagtg
gttcagacagactctactggaagaggcacgcaatctttggattggaatccaaaggaggtt
attctggtagaggagccgaaggacatagattcagttgtagtattgtttcgtaaaggaatg
cgatatcctgattttctttcatcgtttggttttcattcatttgctagtagacgactaacg
gtatttcatgatttatggaagagaggcttttatatttcttctggtgtaaagtttggagca
gactttttggcatatgcagatgatcctattctctttcatgcttcattagcagtagtagtc
gcagaacaagattcaaaaatttccccaagagatttggtagcgtttggaagattaggcgta
tcgaccaagaagagagctacacttgcttatatagacagtgtaaagaatggagaaggtttt
cctcaagtcgtctatataagtattcgttggaatgagtctttgccttag
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