Galdieria sulphuraria: Gasu_60930
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Entry
Gasu_60930 CDS
T02926
Name
(RefSeq) replication factor A1
KO
K07466
replication factor A1
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03030
DNA replication
gsl03420
Nucleotide excision repair
gsl03430
Mismatch repair
gsl03440
Homologous recombination
gsl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gasu_60930
03420 Nucleotide excision repair
Gasu_60930
03430 Mismatch repair
Gasu_60930
03440 Homologous recombination
Gasu_60930
03460 Fanconi anemia pathway
Gasu_60930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsl03000
]
Gasu_60930
03032 DNA replication proteins [BR:
gsl03032
]
Gasu_60930
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_60930
Transcription factors [BR:
gsl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Gasu_60930
DNA replication proteins [BR:
gsl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Gasu_60930
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Gasu_60930
MMR (mismatch excision repair)
Gasu_60930
DSBR (double strand breaks repair)
HR (homologous recombination)
Gasu_60930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
RMI1_C
POT1
DUF936
tRNA_anti_2
DUF223
SHLD2_OB1
Motif
Other DBs
NCBI-GeneID:
17085251
NCBI-ProteinID:
XP_005702788
UniProt:
M2XRH2
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MASSHALSVGSVKAIYAGETTQQAVLQVLELKKIIPSGQNVPQTERYRMVLSDSRHYQQS
MLSTQLNALVREQKVQTGCLVRLLEYVVNDVAQKRIIIVLNLEPVTGPLEKIGNPVNVEQ
AQNVQTGLGSKMRDNLSEQPSRVPSSTDLKQPQTLPEFPNKITRESEKHNASVPLSANSV
NIQSNRTQSFHVKSESGPVVKMEPFVGSNLEPVQSIASLNPYQNKWIIKGRVSSRGEIRH
YQNAKGEGSVFSFEIMDSTASIKVTAFRENASSLYKLIEIGKVYRISKGVLKPADKRFNK
TSFEYEMIADNNTEVVPVEDVGEVPNVIFHFTKIANLENIVAGQFCDVLGIVKDVSELSS
VVSRTTGITLAKRTVVLMDDSLKTIRLTLWKDIAENLLHSSEGNPILLCKGVRRGDFNGI
SLDATVQSCFEVNPDIAEAHELRGWYETTGKHQETSSLEGATSLSLGNTKERKTILQASE
EDIPKLINDPRGVQFIVRGYLHYIRKEGTLWYTASPDDNKKVTKLDENRWVCDATGKEYS
YCNYRYILSVAIQDATGSLNANAFDDVGSRLIGRSAEELAAIYERDRAEFDAIIDDVLFK
PFIFRIRAKQNTWNDELRLRYHIVNVEPIHFSSESQLLLNEIQAFTIC
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcatcctcccatgctctctctgtaggttctgttaaggcaatttatgccggagaaacc
acgcaacaagcagtactgcaggttttggagctaaaaaagataataccaagcggacaaaat
gtgccacaaacagaaagataccgcatggtgctttctgactctagacactaccaacaatcc
atgctatcgactcagttgaacgctttggtgagagaacaaaaggttcagactggttgttta
gtgcggttgttagaatatgtggttaatgatgtggcacagaaacgaatcataatagtcttg
aacttagaacctgtaacaggacctctcgaaaaaattggcaaccccgtaaacgtagaacaa
gcacaaaacgttcaaacagggctaggctccaaaatgcgggacaatctttccgagcaaccg
agcagggtgccttcctcaactgacctcaagcaaccccaaactttgccagagtttccaaac
aaaattaccagagaaagtgagaaacataatgcttcagttccactttctgcgaattctgtt
aatattcaatcgaatcgaactcagtcatttcacgtaaagagcgaatcaggtcctgtcgtg
aaaatggagccttttgttggaagcaatttagagcccgtgcaaagtattgcttcgttgaat
ccataccaaaacaagtggataattaaaggaagggtttctagtcgtggcgaaattcgtcat
tatcaaaatgcgaaaggtgaaggttctgtattcagttttgaaattatggattctactgca
agcattaaagtaacagcctttcgcgaaaatgcctcttctttgtacaagttgatcgaaatt
ggaaaggtttatcgcatttcgaagggtgtattaaagcctgcagacaagcgattcaacaaa
acatcatttgaatacgaaatgatcgctgataataacacagaagttgtccctgttgaagac
gttggagaagttccaaatgttatttttcattttacaaaaatcgcgaacctggaaaacatt
gttgcaggccaattctgcgacgtacttggtatagtgaaggatgtctccgagttgtcttca
gtagtctcgagaactacgggtattaccctggcaaagagaactgttgttttgatggacgac
agtctgaaaaccattcggctaacattatggaaagatatagcagaaaatttactccattct
tccgaaggtaaccctatcttgctgtgtaaaggagttcgacgaggagactttaacggaatc
tctttggatgcaactgttcaatcatgttttgaagtaaaccctgatattgcagaagcacat
gagttgcgcggttggtatgagacgactggtaaacaccaggaaacgagttcattagaggga
gcaacctccttgtcacttggaaatacaaaggaaaggaaaaccattttgcaggctagcgag
gaagacatccctaaactcataaatgatcctcgtggtgtgcaatttatagtacgtggatat
ttacattatattcggaaggaaggaactttatggtacacagccagccccgatgataacaaa
aaggttacgaaactggacgaaaatcgttgggtatgcgatgctaccggaaaggagtattct
tattgcaactatcgttatattttatctgtcgccatacaagatgcaaccggttccttaaat
gcaaatgcttttgatgatgttggttcacgcctgattggtcgatcagctgaagaactagct
gccatttacgaacgtgatagagcggaatttgatgccataattgatgatgttctttttaag
ccattcatttttcgtataagggcgaaacagaatacgtggaacgacgaattacgtcttcga
taccacatcgttaacgtggaaccgattcactttagttcagaatcgcaattattgttgaac
gaaattcaggcgttcacaatctgttga
DBGET
integrated database retrieval system
