KEGG   Gracilibacillus salinarum: MUN87_00575
Entry
MUN87_00575       CDS       T09433                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
gsm  Gracilibacillus salinarum
Pathway
gsm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MUN87_00575 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsm03019]
    MUN87_00575 (rnjA)
Messenger RNA biogenesis [BR:gsm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MUN87_00575 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 DUF4453 Raco_middle
Other DBs
NCBI-ProteinID: UOQ85435
UniProt: A0ABY4GM34
LinkDB
Position
complement(124603..126270)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VQNQDKIKGLFITHGHEDHIGGIPYLLREINVPIYAGKLAMGLIRNKLDEHGLLRKAKLH
TYQEDDIFKFRKTAVSFFRTTHSIPDSYGIVVKTPPGNVVHTGDFKFDFTPVGEPANLSR
MAEIGKEGVLCLLSDSTNSEVPGFTLSERVVGDSINDIFSRVDGRLIFATFASNIHRLQQ
VVEAAVKHNRKIAVFGRSMEGAIKIGQELGYIRAPKNTFIEAHQINQLPANEVTILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTLSVSRIINQLYRAGAEVIHGPL
NDIHTSGHGGQQEQKLMLRLIKPKYFMPIHGEYRMLKEHTKLADSCDIPFKNSFIMDNGE
VLALGKDHAAIAGKIPSGSVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFQI
ASGPDIISRGFVYMRESEDLINEAQKLVSNHLNKVMERRTTQWSEIKNEITDTIAPFLYD
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgatcagactgcagtttttgcattaggtggtttaggtgaaatt
gggaaaaacacgtacggtgttcaatttcaggacgaaatcatcttaattgatgcaggtatc
aaattccctgaagatgagttattgggaattgattatgtaatacctgactacacctacctt
gtgcaaaatcaggacaagataaaaggattatttatcactcatggtcacgaagaccatatc
ggtggtattccttatttacttcgcgagataaatgtgcctatctatgcaggtaaattagca
atgggactaattcgaaataaattggatgaacatggtcttcttcgtaaggcaaaattacac
acttatcaagaagatgatatttttaaattcagaaaaacagctgtgtcgttctttagaaca
acgcacagtattcccgattcctatggtattgttgtgaaaacccctcctggtaacgttgtg
cataccggagactttaaatttgattttacaccggtcggagaaccagccaacttatcaaga
atggctgaaatcggtaaagagggtgtactatgtctgttatcagatagtacaaacagtgaa
gttcccggatttacgttatctgaacgagtagttggtgacagtattaatgatattttctct
agagtcgatggcagattaatatttgctacgttcgcatccaatattcaccgcttgcaacaa
gtcgtggaagccgccgttaaacataaccgtaaaattgccgtattcggccgcagtatggaa
ggtgccataaaaataggacaagaacttggctatattcgtgcgccaaaaaatacgtttatt
gaagcacaccaaattaatcagcttccagctaacgaggtgaccatcctatgtactggttct
caaggggaaccaatggcggcattatcaagaattgctaatggtacacaccgtcaaattcaa
attatacctggtgacacggttgtattctcttcttcaccaatccctgggaatacgctaagt
gtcagccgaattatcaatcaattatatcgtgcaggtgcagaagtcattcacggaccatta
aatgatattcatacatctggccacggtggacaacaagaacaaaaattaatgctgcgttta
attaaacctaagtattttatgccgattcacggggaatatcgtatgttgaaagaacatacg
aaactggctgacagttgtgacatcccgttcaaaaacagctttatcatggataatggtgaa
gtattagcattagggaaagatcacgctgcaattgcaggaaagattccttccggttctgtc
tatgttgatggcagcggtattggagatattggtaatatcgtattacgcgatcgacgaatc
ctttctgaagaagggcttgtcatcgtcgtggtcagcatcaatatgaaggaattccaaatc
gcttccggtccggatattatttcacgaggtttcgtgtatatgagagaatccgaagactta
attaacgaagcgcaaaagcttgtgtctaatcatttgaacaaagttatggagcgtcgcaca
acgcaatggtctgagattaaaaacgaaatcaccgataccatcgctccattcttatacgac
aaaaccaaaagacgtccaatgatcttacctattatcatggaagtataa

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