Gracilibacillus salinarum: MUN87_01725
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Entry
MUN87_01725 CDS
T09433
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
gsm
Gracilibacillus salinarum
Pathway
gsm02024
Quorum sensing
gsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN87_01725 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MUN87_01725 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsm03019
]
MUN87_01725 (hfq)
03036 Chromosome and associated proteins [BR:
gsm03036
]
MUN87_01725 (hfq)
Messenger RNA biogenesis [BR:
gsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MUN87_01725 (hfq)
Chromosome and associated proteins [BR:
gsm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
MUN87_01725 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UOQ85653
UniProt:
A0ABY4GN80
LinkDB
All DBs
Position
358009..358233
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AA seq
74 aa
AA seq
DB search
MSQSVNIQDQYLNQLRKERLPVTVFLTNGFQLRGVVKAFDNFTVLLETEGKQQLIFKHAI
STFAPSKNVNLDKE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaatctgtcaatattcaggatcagtatttaaatcaattaagaaaagaacgtttg
cctgttaccgtgtttctaacaaacggatttcagttacgcggtgtagttaaagcgtttgat
aattttaccgtactgcttgaaacagaaggtaaacaacagcttattttcaagcatgcgatt
tctacctttgcaccatccaaaaatgttaatctagacaaggaataa
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