Gracilibacillus salinarum: MUN87_11700
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Entry
MUN87_11700 CDS
T09433
Name
(GenBank) polysaccharide lyase family protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
gsm
Gracilibacillus salinarum
Brite
KEGG Orthology (KO) [BR:
gsm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MUN87_11700
Enzymes [BR:
gsm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
MUN87_11700
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PEGA
DUF5001
Motif
Other DBs
NCBI-ProteinID:
UOQ83426
LinkDB
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Position
complement(2547912..2549540)
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AA seq
542 aa
AA seq
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MRSNLKRNALFMIFAAIIIVAGMVFPAEKGQAATVYVTDNGSTLVINTGAGLEYTVDKDN
GDITSSKMNGVELTGSTKNSHIASGLGSGADVTWSKSPSGSTVLITVSTDTLTHYYSSRG
GQNIIYMATYTTQEPSVGELRYIFRGNGNVLTDVPERSNNRGTTGAIESSDVFGHSNGYT
TSKYYGNDQAKDLTIKGATGNNVGVFMAYGNREKSSGGPFFRDIQFQSGGDTEIYNYMNS
GHAQTEDWRMGLHGPYALVFTTGSTPSIPDFSWMSSLNLQGWVSSRGKVVLNGLSGMDSN
YEYTVGFSNDNAQYWTTASSSGTAVKDGMIPGTYTMTVYKKELEVYSEQVTVSANQTTTL
NTRTINNDPSADVAIWRIGDWDGTPWELKNGQTIPLRHPSDSRNQSWGPVTYAVGSATNK
YPAIQFRGENSPTTVTFNLTAAQAASSHELNIGITTAYNGGRPSITMNGSSLGFHSPSNQ
PNSRSFTIGTYRGNNTTFSWTVPASDLVEGTNTMTITPVSGSSDLGNWLSAGWVYDTVEL
ID
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcaacttaaaacgtaatgcactctttatgatcttcgctgcaatcatcatcgtg
gcaggtatggtatttccggctgaaaaaggacaagctgctactgtttacgtgacggataac
ggttctacattggtaattaatacgggtgctggtctggaatacacagtcgacaaagataat
ggtgatattacttctagtaaaatgaatggagtagagctgaccggttccacaaaaaattcc
catattgcttccggtctcggttcgggtgcagatgtgacctggagcaaatcgccatcaggc
tctactgtacttattaccgttagtactgatacacttacacattactattcatcaaggggc
ggacaaaatattatttatatggcaacctacacaacacaggagccgtccgttggggaactg
cgttacatattccgtgggaatggtaacgtgttaaccgatgtaccggaacgctcgaacaat
agaggaacaacaggggcgatcgagagctctgatgtgtttggtcattccaatggctatacc
acttcgaaatactatggcaatgatcaggccaaggatttaacgataaaaggtgcgacaggg
aataatgtcggtgtctttatggcgtacggtaatcgtgaaaaaagttctggcggtcctttt
ttccgggatattcaattccagagtggaggagacaccgaaatttataattatatgaattca
ggacatgctcagacagaggactggcggatggggcttcacggtccatatgcattagtattt
acgacaggttcaacgccaagtattcctgatttcagctggatgtcgagtctgaatctgcaa
ggttgggtttccagcaggggaaaagtggtattaaacggcttgagtggtatggattcgaac
tatgaatatacggttggattttccaatgataatgcccaatactggacgactgcatcttct
tctggaaccgcagtgaaagacggcatgatcccagggacgtatacgatgaccgtttataaa
aaagaactggaggtatacagcgaacaggtgacagtatcggctaatcaaacgactacgcta
aatacgagaaccatcaacaatgatccgagcgcagacgttgcgatttggcggattggagat
tgggacggaacaccttgggagctgaaaaatgggcaaacgattccgctccgtcatccttct
gacagccgaaaccagagctgggggcctgtgacatatgcagtgggaagtgcaacgaacaaa
tacccggcgattcaattccgtggtgagaattcacctacaacagtgacgttcaatctgact
gcagctcaggcagcttcctcacatgaattaaatattggtattacaactgcctataatggt
ggcagaccaagtattacgatgaatggttcatcattaggctttcatagtccatccaatcag
ccgaattcgcgtagcttcacgattggaacctaccgaggtaacaatacgacattctcctgg
accgttcctgcttctgatctggtagaaggaacgaatacgatgacgattacgccggttagt
ggttccagtgacttaggtaactggttaagtgctggctgggtgtacgatacggtggaatta
attgattga
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