Gracilibacillus salinarum: MUN87_14315
Help
Entry
MUN87_14315 CDS
T09433
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
gsm
Gracilibacillus salinarum
Pathway
gsm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUN87_14315 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsm03021
]
MUN87_14315 (rpoB)
03400 DNA repair and recombination proteins [BR:
gsm03400
]
MUN87_14315 (rpoB)
Enzymes [BR:
gsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUN87_14315 (rpoB)
Transcription machinery [BR:
gsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUN87_14315 (rpoB)
DNA repair and recombination proteins [BR:
gsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUN87_14315 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UOQ83902
UniProt:
A0ABY4GKC0
LinkDB
All DBs
Position
3074874..3078416
Genome browser
AA seq
1180 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTASYQWFLDEGLREMFQDISPIEDFAG
NLSLEFVDYSLGEPKYPVDESKERDVTYNAPLRVKVRLLNNETGEVKEQEVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFNSKIDKNGKRGYGATVIPNRGAWLEFETDAKDVV
HVRIDRTRKLPITVLLRALGFGDDQEILDLFGENDYLKNTLEKDNTETSEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLAHVGRYKINKKLHLKNRLFNQILAEPLVDPETG
EVIANKGDKLDRRLLDKILPILDSDENRFGERVIEPHEGVVEDPISVQSIKIMDPTDPEG
ERTLTVLGNCNVDSGIKNITPADILSAISYFFNILHQVGDTDDIDHLGNRRLRSVGELLQ
NQFRIGLSRMERVVRERMSIQDTSSITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPL
AELTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKV
NKFGFIETPYRRVDPETGRVTERMDYLTADEEDNYVVAQANAKLDEDGTFSDEEVIARFR
GENTIVNREKLDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMQPKSPI
VGTGMEYVSGKDSGAAVICKHEGIVERVEAKEVLVRRITEVDGREVEGDLDRYRLQKFIR
SNQGTCYNQRPIVAKGNRVTKGEILADGPSMEKGELALGQNVLVGFMTWEGYNYEDAIIM
SERLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRDLDERGIIRVGAEVE
DGDLLVGKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNRAD
GDELPPGVNQLVRAYIVQKRKIHEGDKMAGRHGNKGVISKILPEEDMPFLPDGTPIDIML
NPLGVPSRMNIGQVLELHLGMAARQLGIHVASPVFDGAREEDVWETLEEAGLPRDAKTIL
YDGRTGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGE
MEVWALEAYGAAYTLQEILTVKSDDTVGRVKTYEAIVKGDNVPEPGIPESFKVLIKELQS
LGMDVKMLSGDEQEIELRDEDEDDGQSADNFNLEIEETTS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatatggtcgacaccgccagcgcagaagttacgcgcgtatc
agcgaggttttagaattaccgaatttaattgagattcaaaccgcatcttatcaatggttc
ttagacgaaggtttacgagaaatgttccaggatatttcgccgattgaagatttcgccgga
aatttatctttggaatttgtagattacagtctgggagaacctaagtatccggtagatgaa
tccaaagaaagagatgtaacctataacgctcctctacgagtaaaggttcgtttattaaat
aacgaaacaggcgaagtgaaagaacaagaagtgtttatgggtgatttcccattaatgacg
gaaacaggtacttttgttattaatggtgcagaacgtgttattgtttcacagcttgttcgt
tcgccaagtgtttatttcaactctaaaattgataaaaacggtaaacgtggctatggtgct
acggttatccctaacagaggtgcttggttagaatttgaaacagacgctaaggatgttgtg
catgtcagaattgaccgtacaagaaagctgccgataacagtccttttgagagcattaggt
tttggggatgaccaggaaattctggatttattcggagagaatgattacttaaaaaacacc
cttgaaaaagataatacagaaacaagcgaaaaagcgttattagaaatatatgagcgcctt
cgcccgggagaaccaccaactgtagaaaatgctaaaagtctattggtctccagattcttt
gatccaaagagatatgacttggcacacgttggtcgatataaaatcaataaaaaattacat
ttgaaaaatcgtttatttaatcaaatcctggcagagccacttgttgatcctgaaacagga
gaagtaatcgcaaataaaggtgataaattagatagacgattattagataaaattttacca
atactagactcagacgaaaatcgtttcggtgagagagtgatagagcctcatgaaggtgtg
gtagaggatccgatcagtgtacaatcaattaagattatggacccgactgaccctgaaggc
gaaagaacactaacggtgttaggtaactgtaacgtagacagtggaattaaaaatattacg
cctgctgatattttgtcagcaatcagttatttctttaacattcttcaccaggtaggcgac
acagatgatattgaccaccttggtaatcgtcgccttcgttcagtaggtgaattgttacaa
aaccaattccgtatcggtttatcccgtatggagcgtgttgttcgtgaaagaatgtcgatt
caggacacttcttcgatcacaccgcaacaacttattaatattcgacctgtgattgcgtct
attaaagagttctttggtagttcacaattatcacagtttatggatcaaaccaatccatta
gcagaactaacacataagcgacgcttgtctgctctagggccaggtggtttaacgcgtgaa
cgtgctggttttgaagtgcgtgacgttcactattctcactacggtcgtatgtgtccgatc
gaaacgcctgagggaccgaacatcgggttgattaactccttgtcttcttatgcgaaagta
aacaaatttggtttcattgaaacaccataccgcagggtagatcctgaaacaggtcgtgtt
acggaacgaatggattacttgactgctgatgaagaagataactatgtagtagcccaagcg
aacgcgaaactagacgaagatggcacgttttcagatgaggaagttattgctaggttccgt
ggtgaaaacacgatcgttaatcgcgaaaaacttgactacatggatgtatcgcctaagcag
gttgtttcagccgcaacggcatgtattccgttcttggagaacgatgactccaaccgtgcg
ttaatgggtgcgaacatgcagcgtcaggctgtaccacttatgcagccgaagtcaccaatt
gtaggtactggtatggaatatgtatcagggaaagactctggtgctgcggtaatctgtaaa
cacgaaggtattgtggaaagagtagaagcgaaagaagtattagttcgccgcattaccgaa
gtggatggaagagaagtagaaggtgacctggaccgttaccgtctgcagaaattcatccgt
tctaaccagggtacttgttataaccaacgccctatcgttgctaaaggtaatcgtgtaacg
aaaggcgaaatattagctgacggtccatcaatggaaaaaggcgaattggcactaggtcaa
aacgttcttgtcggatttatgacatgggaaggttataactacgaggatgccatcattatg
agcgaacgccttgttaaagatgatgtgtatacgtcgatccacattgaagaatatgaatct
gaagcgcgtgatacgaaactaggaccagaggaaatcacacgtgacattccgaacgtcggg
gaagatgcactacgtgacctggatgaaaggggtattattcgtgtcggtgcggaagtggaa
gatggcgatttattagtaggtaaagtaacacctaaaggggtaacagaactatctgcggaa
gaacgattattacatgctattttcggtgagaaagctcgtgaagttcgtgatacatcgctg
cgagtaccacacggtgcaggcggtattgtattagatgtgaagatcttcaatcgtgctgat
ggtgatgaattaccacctggtgtaaatcaattagttcgtgcctatatcgttcagaaacgt
aagattcacgaaggggataagatggccggtcgtcacggtaacaaaggtgttatctccaaa
attttaccggaagaagatatgccgttcttacctgacggtacaccaatcgacattatgttg
aatccattaggggtaccatctcgtatgaacatcggacaagtgcttgaattgcacttaggt
atggctgccagacaattaggtattcatgtcgcatcacctgtatttgatggtgctcgtgaa
gaagatgtttgggagacgcttgaagaagcaggtttaccacgtgatgcgaaaacaattctg
tatgacggaagaacaggtgaaccgtttgataaccgtgtatctgtcggtgtcatgtatatg
atcaaacttgctcacatggttgatgataaattacacgctcgttcaacaggtccttactca
cttgttacacaacaaccactaggtggtaaagcacaatttggtggtcagcgttttggtgag
atggaggtatgggcattagaagcatacggtgcagcctatacactgcaagaaatcttaacc
gttaaatcggatgataccgttggacgtgtgaagacgtatgaagccattgtgaaaggtgac
aatgttcctgaacctggaattcctgagtctttcaaagtattaatcaaagaattacagagt
ttaggtatggatgtcaaaatgctatctggcgatgaacaagagatcgaacttcgtgatgaa
gatgaagatgacgggcaatcagcagataacttcaacttagaaatagaagaaacaaccagc
tga
DBGET
integrated database retrieval system
