Gracilibacillus salinarum: MUN87_16385
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Entry
MUN87_16385 CDS
T09433
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gsm
Gracilibacillus salinarum
Pathway
gsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN87_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsm03019
]
MUN87_16385
03009 Ribosome biogenesis [BR:
gsm03009
]
MUN87_16385
Enzymes [BR:
gsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUN87_16385
Messenger RNA biogenesis [BR:
gsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN87_16385
Ribosome biogenesis [BR:
gsm03009
]
Prokaryotic type
rRNA helicases
MUN87_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
UOQ84272
LinkDB
All DBs
Position
3506177..3507646
Genome browser
AA seq
489 aa
AA seq
DB search
MTNFNELGISAPIMQALEKMGFEEATPIQAQTIPLGMAGKDVIGQAQTGTGKTAAFGIPM
IEKINPNERKIQGLVVAPTRELAIQVSEEIHKLAKIKGVRTLPVYGGQHMERQIRALKDR
PHIVVATPGRLLDHLRRRTIRVENVHTAVLDEADEMLNMGFIDDIRDILKAIPEERQTLL
FSATMPKEIRDIATTLMKEPEEVKVKSKEMTVSNIDQFFVEVHEKQKFDTLTNLLDIHVP
ELAIIFGRTKKRVDELTEGLQARGFRAEGIHGDLTQGKRSSVLKKFKFGRIEILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKMGEAISFITPREVPHLHLIEKVTK
SKMKRMSAPSYDEAKRGQQQLTMEKLIKTIEKRELQDYRETASELLDQYDSVTVVAAALK
MLTKERRQTPVTLTSVQPVSVKKASKNKGGNNKKFRNDKRGGYNGRKGKQGGGSNRKFQN
KRSKGNQNR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaattttaatgaattaggtatttcagcaccaattatgcaagcattagagaagatg
ggattcgaagaggcgacaccaattcaggcacagacgattccattgggtatggctggtaag
gatgttattggtcaagcgcagacaggtacagggaaaactgctgctttcggtattccaatg
atcgaaaagattaatccgaatgaacgaaaaatacaaggattagttgtcgcaccaactaga
gaattagcaattcaggtgtcagaggaaatccataaattagctaaaatcaaaggtgttcgc
acgttgccggtatatggcggtcaacatatggaacgtcagatcagagcattaaaagatcgt
ccacatattgttgtagctacaccaggacgactattagaccacttacgtcgtcgtacgatc
agagtggagaacgtgcatacagctgtattagatgaagcggacgaaatgttgaacatgggc
tttattgatgatattcgtgatatccttaaagcaattccggaagaaagacaaacattgctt
ttctcagctacaatgccgaaagaaattcgcgatattgcaacgacattgatgaaagagccg
gaagaagtaaaagtaaaatcaaaagaaatgacggtatctaatattgatcagttctttgta
gaagtacacgaaaagcaaaaattcgatacgttaaccaatcttttggatattcacgtacca
gaattggcgattatttttggtcgtaccaagaagcgtgttgatgagttaacagaaggattg
caggctcgcggtttccgtgcagaaggcattcatggtgacttaacacaaggtaaacgtagt
tccgtacttaagaaatttaaatttggccgaattgaaattttagttgcaacggatgtagcg
gcacgtggtcttgatatttcaggtgtgacacatgtttataactttgatattccacaggat
ccagaaagctatgtacaccgtattggacgtactggtcgtgctggtaagatgggggaagca
atttcctttatcacgccaagagaagtaccacatttgcatttaattgaaaaagtaacaaag
agtaaaatgaagcgtatgagtgcgccgagttatgatgaagcaaaacgtggtcagcaacaa
ttaactatggaaaaactaatcaaaaccattgaaaaaagagaattacaggactaccgtgaa
acagcatctgagttgttagatcagtatgattctgtaacagttgttgcagctgcgttgaaa
atgctgacaaaagaaagaagacaaacacctgtaacacttacttcggttcagccggtaagt
gtgaagaaggcttcaaaaaacaaaggtggcaacaacaaaaaattccgtaatgataaacgt
ggcggatataacggtcgtaaaggaaaacaaggtggcggatccaaccgtaaattccagaac
aaacgatccaaaggaaatcaaaatagataa
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