Gynuella sunshinyii: YC6258_00138
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Entry
YC6258_00138 CDS
T03690
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
gsn
Gynuella sunshinyii
Pathway
gsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YC6258_00138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsn02000
]
YC6258_00138
Transporters [BR:
gsn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YC6258_00138
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GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AJQ92194
UniProt:
A0A0C5VPL1
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Position
120994..122820
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AA seq
608 aa
AA seq
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MIITLPLIHWEQLMKRTLYKAILFSTALASSSLLYAADMSKTLRVEFDAGATGFDPAKVS
DGYSNDVNENIYDTLLTYDYLARPIKIIPNVVEDMPKISNDGKTYTFKIKPGIYFADDPA
FKGKKRELVAADFVYSIKRLLDKTINSPQSYLVDGKFVGVDELVKQAGQGPLNYDTEVEG
IKALDKYTLQLNLTDVNYNFATILAMPAFSAVAREVVETYAENTNAHPVGTGPYMLKEWK
PGSKITLTANPGFRKEVFNFKADKSDPVSVAVAKEMKGKVIPQTGNIEISVIEEEQPKWL
AFLNQQLDILLRGIPQPALKEALIINPENPLDVKLAPKYADMGIQMQRKKMLEITFYFFN
MKDPVVGGYSADKIALRRAIAMAFPRQETIARIRRGQAVPVEYAIPEGVAGHNPKARDGA
KFDPAKANALLDAVGYKIGADGYRTLPDGSPLSVEMGTGTAAIDREWNEYWQQAFDSLHL
KLTFKTGKWSELSKANREGKLQMWSLAWAADYPDGENFMQMFYGPNGGDSNFAFFDLPAF
NQYYEEALKLPNGNKRQSLYDKMDKLIAQYQPYIFSDTRVRSIVTQSYVHGFKTHPILSG
WRYVELDK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaccctgccattgatacattgggagcaattgatgaagcgaacactctataaa
gcgattcttttttcaaccgcattggcctcttcaagcctgctttatgccgcggatatgagc
aaaaccctcagggttgaatttgacgccggagccaccggtttcgacccggccaaggtgtcc
gatggttattcaaatgatgttaatgaaaatatttacgacaccttgctcacttatgactac
ctggcccgccccatcaagattattcccaatgtcgttgaggacatgccaaaaatcagcaat
gacggtaaaacctatacctttaaaatcaagccaggtatttattttgccgatgacccggca
tttaaaggaaaaaaacgtgagctggtggcagccgacttcgtctattcaatcaagcgcctg
ctggataaaaccattaattccccgcaaagctatctggtggatggcaaattcgtcggcgtc
gacgaactggtcaagcaggccggtcagggaccgttgaactacgataccgaagtagaaggt
atcaaagcgctggacaaatacaccttgcaattgaacctgaccgacgtgaactataacttt
gccaccattctggcaatgccggctttcagcgcagtcgcccgcgaagtcgttgagacctat
gccgagaataccaacgctcacccggtgggtaccgggccgtacatgctcaaagaatggaag
cctggctctaaaattacgttgaccgccaacccgggattccgcaaagaagtgttcaatttc
aaagcggacaagtcagatccggtttccgtcgccgttgccaaagaaatgaagggtaaagtg
attcctcagactggcaatattgaaatcagcgtcatcgaagaagaacagcctaaatggctg
gcgtttctcaatcagcagctggatattctgttacgcggcattcctcagccagctctgaaa
gaagctctgatcatcaatccggagaatccactggacgtcaaactggcccccaaatatgcc
gacatgggcattcagatgcagcgtaaaaaaatgttggagatcaccttttacttcttcaac
atgaaagatcccgtagtgggtggttacagcgcagacaaaatcgccctgcgccgggctatc
gccatggcgttcccgcgccaggagaccattgcccgtattcgtcgcggtcaggcggttcct
gtggaatatgccattccggaaggcgttgccggccacaaccccaaagcccgtgatggcgct
aaattcgatcctgccaaagccaatgccctgctggatgctgttggttataaaatcggtgcc
gatggctaccgtaccctgccggacggctctcctctaagcgttgaaatgggcaccggcacc
gctgccatcgacagagaatggaatgagtactggcagcaggcgtttgattcactgcacctg
aaactcacctttaaaaccggcaaatggagtgagctgtccaaagccaaccgtgaaggcaaa
ctgcaaatgtggagccttgcctgggcggccgattaccctgatggtgagaacttcatgcaa
atgttctatggccccaacggcggggactcaaacttcgctttcttcgatctgccggcgttt
aaccagtactacgaagaagctctgaaactgccgaacggaaataaacgtcaatcactgtat
gacaaaatggacaagctcattgcccagtatcaaccctatattttcagcgatacccgggtc
agaagtatcgtcacgcaaagctatgtgcatggattcaaaacccatccaatcctcagcggc
tggcgttacgttgaacttgataagtaa
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