Gynuella sunshinyii: YC6258_00475
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Entry
YC6258_00475 CDS
T03690
Name
(GenBank) sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain
KO
K14414
transcriptional regulatory protein RtcR
Organism
gsn
Gynuella sunshinyii
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsn03000
]
YC6258_00475
Transcription factors [BR:
gsn03000
]
Prokaryotic type
Other transcription factors
Others
YC6258_00475
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
MCM
AAA_16
NACHT
AAA_19
AAA_2
NTPase_1
ABC_tran
AAA_18
ATPase_2
AAA_30
T2SSE
AAA_22
AAA_14
AAA_29
AAA_33
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJQ92525
UniProt:
A0A0C5UYX0
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All DBs
Position
complement(437812..439473)
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AA seq
553 aa
AA seq
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MYSIDPDPVFRNTDRNLSSFIEIDHMKTVVIGLLGTVLDARGKGVKRWNKWRPTVGIFMQ
EDLLVDRLELIHDARDHRLANNVGADVQTVSPDTEVQLHELRFENPWDFEQVYSTLLDFV
EHYPFKPDQERYLLHITTGTHVAQICWFLLCEANYVPAVLLQTSPGRGDNGVSGQCHLID
LDLSKYDAISSRFKRRQLEGTEFLKSGIATRNRQFNAMIQQIEQVAIRSVAPILITGPTG
AGKSQLASRIYELKKMRGSIQGELVAVNCATLRGDSAMSALFGHKKGAFTGAQNARKGLL
NKADQGLLFLDEIGELGLDEQAMLLHAIEEKTFYPVGADGPVSSDFQLIAGTNRDLQQQV
AEGRFREDLLARINLWSYELPGLRHRREDIEPNLDYELQQAESQMGYKVSFNKTARQRFL
DFATSPEALWSGNFRDLNACIQRMSILSDGGRINEALVQQECERLLTWWKPAEVNDSLPA
LEEILEPEQLADMDLFDQQQLRHVVAVCRDSQNISQAGRKLFNRSRLKKSSANDSHRLRQ
YLAKFDLKFERVQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcattgaccccgacccggtctttaggaatactgatcgaaatttatcgtcattt
atcgaaatagatcatatgaaaacggttgtgattggtttgctgggcaccgtactggatgcc
cgcggtaaaggggtcaagcgctggaataaatggcggccgacggtcggtatcttcatgcag
gaggatctgctggtggatcgtctggagctgattcacgatgcgcgtgaccatcggctggcc
aataatgtcggcgcggacgtgcagacggtctcgcccgacaccgaagtgcagctgcatgag
ctgcggtttgagaatccatgggattttgagcaggtctatagcaccctgctggacttcgtg
gagcattatccgttcaagccggatcaggagcgctacctgctgcacatcaccaccggtacc
catgtggcgcagatctgctggtttctgttgtgcgaagccaactatgttccggccgtgttg
ctgcaaacctcgcctgggcgtggcgataatggagtgtcaggtcagtgccatctcatcgat
ctggatctctccaaatacgatgccatcagttcccgtttcaagcgtcggcaactggaaggc
actgagtttctgaaatctggcattgccacccgcaatcgccagttcaatgccatgattcag
cagattgagcaggtagcaatccgttcggtggcgccgatattgattaccgggccgaccggt
gcgggcaaatcacagctggccagccggatttatgagctcaaaaaaatgcgtggctcgatc
cagggggagctggtggcggtgaactgtgccactttgcgcggtgacagtgccatgtcggca
ttgtttggtcataagaaaggagcgttcaccggcgctcagaatgcccgcaaaggtttgttg
aacaaagctgatcagggtttgttgtttctggatgaaattggtgaactgggattggatgaa
caggccatgttgctgcatgccattgaagaaaagacgttttatccggtgggtgcggatggt
cccgtcagcagcgattttcagctgattgccggcaccaatcgggatcttcaacagcaggtg
gcggaaggccgttttcgggaggatctgctggcgcgaatcaatctctggagttacgaattg
cccggtttgcggcatcgacgtgaagatattgaacccaatcttgattatgagttgcagcag
gcggaaagccagatgggttacaaagtcagtttcaacaagaccgcgcggcagcgatttctc
gattttgccaccagtcctgaggctttgtggtcaggtaattttcgtgatctcaatgcctgt
attcagcgtatgagtatcctctcggatggcggacgtatcaatgaagctctggttcaacag
gagtgtgagcgcttgctgacctggtggaaaccggcagaggtgaatgactcgttaccggca
ctggaagaaatcctggagccggaacaactggctgatatggatctgttcgaccagcagcaa
ctccgtcatgtggtggcggtgtgtcgggacagtcagaatatttctcaggcgggtcgtaaa
ctgttcaatcgttcgcgattaaagaaaagttctgccaatgactcgcatcgattgcgacag
tatctggccaagtttgatctaaagtttgaacgggtgcagtga
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