KEGG   Gynuella sunshinyii: YC6258_00835
Entry
YC6258_00835      CDS       T03690                                 
Name
(GenBank) superfamily I DNA and RNA helicase
  KO
K03656  ATP-dependent DNA helicase Rep [EC:5.6.2.4]
Organism
gsn  Gynuella sunshinyii
Brite
KEGG Orthology (KO) [BR:gsn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsn03400]
    YC6258_00835
Enzymes [BR:gsn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     YC6258_00835
DNA repair and recombination proteins [BR:gsn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    YC6258_00835
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 Cullin_Nedd8
Other DBs
NCBI-ProteinID: AJQ92885
UniProt: A0A0C5UZZ5
LinkDB
Position
complement(824129..826153)
AA seq 674 aa
MSRLNSRQQEAVNFIGGPLLVLAGAGSGKTSVITQKIAYLISECGIKAHHIAAVTFTNKA
AREMKQRVSKLLKGKSTRGLIVSTFHNLGLNILRKDGTAIGIKNGFTLFDQQDSLAIIKN
IIATDYPNEMDQADFFQHLISNWKNDLISPAQAKSHATEENVVMAAEVYDAYCRMLSAYN
ATDFDDLIRLPALLFQQHPDILHKWQNRIRYLLVDEYQDTNTSQYLLVKYLVAGRADFTV
VGDDDQSIYAWRGARPENLVQLQTDFPSLKVVKLEQNYRSTSRILKAANTVIDNNPHVFT
KTLWSEMGYGDPIRIFRCANDEAECERVASEIVAAHLQKKIPYQDFAVLYRGNHQSRILE
IKLQANQIPYTVNGGTSFFSRAEIKDVMGYLRLLINPDDDAAFLRIINTPRREIGPATLE
KLNDYAAGRSISLFKACSEMGLRLHLPEKAADKLVQFVRWMEDTAEKVYRHETPAQILRE
MLADIEYEFWLRQDSGSAGMAERRWSNVNQLIDSITNMLEKEDPETDEKIAIEDAIAKLI
LRDLMERQEEEGQLDSVQLMTLHASKGLEFPHVYMIGLEEELLPHRNSIESGDIEEERRL
MYVGITRAQKTLTLTYAAKRKQFGEIIDCIPSRFLDELPADDLEWHGRDGAISAEQNRAQ
GLAALQSLSSLLGD
NT seq 2025 nt   +upstreamnt  +downstreamnt
ttgagcagactgaacagccgacaacaagaagccgtcaattttattggtggaccattactg
gtgctggctggtgctggcagcggtaaaaccagcgtcataacacagaaaattgcctacctg
atcagcgagtgtggcattaaggcccatcatattgccgctgtcaccttcactaacaaagca
gcgagggaaatgaaacaacgggtcagcaaactgttaaaaggtaaaagcacacgcggtctg
atcgtctcaaccttccacaatctgggtctgaacatcctgcgtaaagacggtaccgccatc
ggcattaaaaacggctttaccctgttcgaccagcaggattccctggccatcatcaaaaat
atcattgccaccgattatcccaatgagatggatcaggcagacttctttcaacacctgatc
agtaactggaaaaatgacctgatcagtccggcgcaagcaaaatctcatgccactgaagaa
aatgtcgtcatggccgccgaggtatatgacgcctattgccgaatgctgagcgcgtacaat
gccaccgactttgatgatctgatccggctgccagcactgctgttccaacagcatccggat
attctgcacaaatggcagaaccggatccgttacctgctggtggacgaatatcaggacacc
aataccagtcagtatctgctggtaaagtatctggtcgccggccgtgctgactttactgtc
gtgggtgacgacgatcagtccatttatgcctggcgcggtgcccggccggaaaacctggta
cagctgcaaaccgacttccccagcctgaaagtggtcaaactggaacagaactaccgctca
accagtcgaattctgaaagccgccaacaccgttatcgacaataacccgcacgtattcacc
aaaaccctgtggagtgaaatgggctatggcgatccaatccggatctttcgttgcgccaat
gacgaagccgaatgcgaacgcgttgccagcgagatagtggccgctcacttacagaaaaaa
attccgtatcaggatttcgccgtactgtatcgcggtaaccatcagagtcggattctggag
atcaaacttcaggccaatcagattccctataccgtcaatggcggcacctcgtttttctcc
cgcgcggaaatcaaagacgttatgggttacctgcgcctgctcatcaatcccgatgacgat
gccgccttcctgcgcatcatcaacacccccagacgggaaatcggtccggcgaccctggaa
aaactcaatgattatgctgccggccgcagcatcagtctgtttaaagcctgctccgaaatg
ggcttgcggctgcacctgccggaaaaagcagccgacaagctggtacagttcgttcgctgg
atggaagataccgccgaaaaagtctatcgccatgaaaccccggcccagatcctgcgggaa
atgcttgcggatatcgaatacgagttctggttgcgccaagacagcggctcagccggaatg
gccgagcgtcgctggtccaacgtgaatcagttgattgattccatcaccaacatgctggaa
aaagaagacccggaaaccgacgaaaaaattgccattgaagacgccatcgccaagttgatt
ctgcgcgatctcatggaacgtcaggaagaggaagggcagctcgactccgttcagctcatg
accctgcatgcctccaaaggtctggaatttccgcatgtatacatgatcggcctggaagaa
gaactgctcccccatcgcaacagcatcgaaagcggggatatagaggaagaacgacgactg
atgtacgtgggaatcacccgggcgcaaaaaaccctgaccctcacctatgccgccaaacgc
aaacagtttggcgaaattatcgactgcatcccaagccggtttctggacgagctgccggcc
gatgacctcgaatggcacggccgcgacggcgcgatttccgccgaacagaaccgggcccag
ggactggcggcattacagagtctgagcagcttgttaggcgactaa

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