Gynuella sunshinyii: YC6258_01094
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Entry
YC6258_01094 CDS
T03690
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn00300
Lysine biosynthesis
gsn00470
D-Amino acid metabolism
gsn01100
Metabolic pathways
gsn01110
Biosynthesis of secondary metabolites
gsn01120
Microbial metabolism in diverse environments
gsn01230
Biosynthesis of amino acids
Module
gsn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YC6258_01094
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YC6258_01094
Enzymes [BR:
gsn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
YC6258_01094
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AJQ93142
UniProt:
A0A0C5VF05
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Position
complement(1081939..1083183)
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AA seq
414 aa
AA seq
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MNPFQYRDNELYIEELPLTEVAAQHGTPLYVYSRQAIETAWHGYADALKDHGMVCYAVKA
NSNIGVLNLLARLGSGFDIVSVGELERVLTAGGDPSKVVFSGVGKQVDEIRRALEVGIHC
FNVESVAELQRINEVAGTMDMQAPVSIRVNPDVDAKTHPYISTGLKQNKFGIDINSAEQV
YALAASLAHINVIGVDCHIGSQITDVTPFLDALDRLLALIDRLAGKGIQIRHLDLGGGVG
VQYQQDEPVVSLTDYVQQIVSRLGARALTLIMEPGRSIVANAGVLLTRVEYLKQNDEHNF
AIVDGAMNDLIRPSLYQAWQDVKPLQLRTGTSHTWDIVGPICETTDFLAKGRQLVIEQGD
ILAIMDSGAYGFTMASNYNSRPRVAEILVDGQQTHVVRRREIFADLIAHEYLIE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattccaataccgagataatgaactgtatatcgaagagctgccactcacggag
gttgctgctcaacatggcacgccactatatgtgtattcccgtcaggctatcgaaaccgcg
tggcacggttatgcagatgcattgaaagatcacggcatggtttgttatgcagtcaaggcc
aattccaatatcggagttctgaatctgctggcccgtctgggatccggctttgatattgtc
agtgtcggtgagcttgagcgcgtgctgaccgccggaggtgatccatccaaagtcgtgttt
tccggtgtcggcaagcaggtcgatgagattcgccgcgcattggaagtgggtattcactgc
ttcaatgttgaatcagtggccgaacttcagcgcatcaatgaagtcgccggcaccatggat
atgcaggcaccggtttcgatccgggtaaaccctgacgtggatgccaaaacccatccgtat
atttcaaccggtctgaagcagaacaaattcggtatcgacatcaactcagcggaacaggtg
tacgccctggcagcgagtctggcgcacatcaacgtcattggtgtggactgccacattggt
tcacagattaccgatgtcactccgtttctggacgcacttgaccggctgctggcactgatt
gatcgtctcgccggcaaaggcattcagatcagacatttggatctcggtggcggtgtcggt
gtgcagtatcaacaggatgaaccggttgtctcactgacagactatgtacagcaaattgtc
tcccgtctgggagcgcgtgccctgacactgatcatggagcccgggcgatccattgtcgcc
aatgcaggggtgctgctgacccgggttgagtaccttaaacaaaacgatgagcataatttt
gctattgttgatggcgccatgaatgatctgatccgcccatcgctttatcaagcctggcag
gatgtcaaaccgttgcaattgcgcactggcaccagtcatacctgggatatcgtcggcccc
atctgcgaaaccacagattttcttgcaaaaggtcgtcaactggtcatagaacagggtgac
attctggcaattatggactccggcgcctatggttttaccatggcatccaattataattcc
cgccctcgggtggcggaaatactggtcgatggccaacagacacacgtcgttcgccgccgt
gaaatttttgctgacctgattgctcatgaatatctgatcgaataa
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