Gynuella sunshinyii: YC6258_01155
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Entry
YC6258_01155 CDS
T03690
Name
(GenBank) periplasmic component of the Tol biopolymer transport system
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn00040
Pentose and glucuronate interconversions
gsn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
YC6258_01155
Enzymes [BR:
gsn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
YC6258_01155
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Gene cluster
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AJQ93203
UniProt:
A0A0C5VIN4
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Position
complement(1144364..1145512)
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AA seq
382 aa
AA seq
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MALGSTTQLQFSTSTDSDTGATVTRLTPQGAICHRTYFYQKSFTDDGKKLLFAGNFDRHW
NYHLLDFESQTATQLTEGSGDNTFGGFLSTDNQSLIFVKHNRSLVRVDLATQQHDTLYEV
EDGWVGYGTWVPNSACTKVVGIEIKASDYIELTDWKKFAELFHRKPRCRLISIDLQTGQR
STILEENTWLGHPIYRPFDDNTVAFCHEGPHDLIKTRMWLVDENGDNVRKVREQEEGEAC
THEFWVPDGSKMIFVSYLHGESDRWICSIEPETLDFKRELKMPPCSHLMSNFDGSMVVGD
GSDTPVDVADDSGHQIENDPNIYVFDLKTGSSRVVCRHDTSWEVLEGSRQVNHPHPSFTP
DNKQVMYGSDKEGTPAIYLATV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggctttaggcagcacaacccagttgcagttttctacctccaccgattctgataccggg
gcaaccgttacccggctgactccgcagggcgcgatttgccatagaacatatttttatcaa
aaaagctttactgatgacggaaagaaattacttttcgccggcaactttgatcgtcactgg
aattaccacctgctggactttgaatcacagaccgccacccaactgacagaaggcagcggc
gacaataccttcggtggttttctcagcaccgataaccaatcattgatcttcgtcaaacac
aatcgcagcctggtacgcgtggatctcgccactcagcagcacgatactctctacgaagtt
gaagatggctgggttggctatggcacctgggtacccaacagcgcctgcaccaaagtggtt
ggcatcgaaatcaaagccagcgactatatcgaactgaccgattggaaaaaattcgccgaa
ctgtttcatcgcaaaccacgctgtcggctgatcagcattgacctgcagaccggtcaaaga
agcaccattctggaagaaaacacctggctgggtcatcctatttaccgaccttttgatgac
aataccgtggcattctgtcacgaaggtccgcacgacctgatcaaaacccgcatgtggctg
gtggacgaaaacggcgacaacgtccgtaaagtccgcgaacaggaagaaggcgaagcctgt
actcacgaattctgggtaccggacggctcaaaaatgatcttcgtttcctacctgcatggt
gagagcgaccgctggatttgctcaatcgagcctgaaaccctggactttaaacgggaactg
aaaatgccgccatgcagccatttgatgagtaattttgatggcagtatggttgttggtgac
ggctcggacacccccgttgacgtggccgatgactctggtcatcaaatcgaaaatgacccg
aatatctatgtattcgatctcaaaaccggttccagccgggtagtatgtcggcacgacacc
agctgggaagtactcgaaggcagccgccaggtgaaccatccgcatccgtcgtttacaccc
gataacaaacaggtcatgtacggctcggataaagaggggacacccgccatttatctggct
accgtataa
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