Gynuella sunshinyii: YC6258_01255
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Entry
YC6258_01255 CDS
T03690
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn00040
Pentose and glucuronate interconversions
gsn01100
Metabolic pathways
gsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
YC6258_01255
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YC6258_01255
Enzymes [BR:
gsn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
YC6258_01255
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJQ93303
UniProt:
A0A0C5VIX1
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Position
1238113..1239717
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AA seq
534 aa
AA seq
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MVMNKYFRLGGWSLAGMGMIFLGVEAAASSLEGYAAMNGGTTGGEGGEIVHVSSGAGIHE
AMCNRAADDTPLIIYVSGTINHDNTAKFSGSCDTTDSSIQFKRVSNISLIGEGDGAVFDE
IGIHIRESSNIIIRNIHVRNVKKSGSPISNGGDAIGLEKDVHNIWIDHCELEASGGEKDG
YDSLIDMKAGVQYVTVSYNYLHHSGRGGLIGSSDSDNENNYITFHHNWYESVDSRMPLLR
YATAHAYNNYYQHISKSAMNPRIGGRIKAENNYFEDVNNPIGTFYTTDMGFWDVSGNIFD
NVTWSPSEQEFPAGPDIVSTTTIEIPYSYTLDAAKCVKDIVTSLAGDNRNLAVSAGDCQV
DSGDDSDSTVTPSITLSAKLNDNNEVQLNWDITDASVAGLQLYRDVDSNPDGRERLVLLS
ADSRSYLDTTVSPGLTYYYWVKVSQTELSDFNSEAASVTIPAISDDSGDGHNNDGNDNGD
GSSEGNNSDTNVPETGSSDTQTDSVSVKINGSGTFGGLGLGLLLMFAMIRRTGR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgaacaagtatttccggttgggcggatggtcgctggctggcatgggaatgatc
tttttgggtgttgaagccgcggcatcctccctcgaaggctatgcggctatgaatggtggt
accaccggtggagagggaggtgaaattgttcacgtgagcagtggcgcaggcattcatgaa
gccatgtgtaatcgcgctgccgatgatactcctctgattatttatgtcagtggtacgatt
aatcatgataatacggcaaaattcagtggtagctgtgataccaccgatagttcaatccag
tttaaacgggtgagcaatatttcgctgatcggtgaaggagatggcgcggtatttgatgag
attggtattcatattcgggagtcctcgaatattattatcagaaatattcatgtccgtaat
gtaaaaaaatcagggtcgccgatttccaatggcggggatgccatcggtctggaaaaagat
gttcataatatctggatcgaccactgtgagctggaagcttccggtggtgaaaaagacggt
tatgattctttgatagatatgaaagccggtgttcagtatgtcaccgtttcctataattac
ctgcatcactctggtcggggaggactgattggatcgagtgacagtgataatgagaataac
tacatcacctttcatcacaattggtatgagagtgtagactcccgtatgccgttgctgcgt
tatgccactgcccatgcctacaataattactatcagcatatttccaaatcagccatgaat
ccccgtataggtggtcggataaaagctgaaaataactacttcgaagatgtgaataatccg
ataggtactttttatacgacagatatgggtttctgggatgtcagtggaaatatatttgac
aatgtcacctggagtccatctgaacaggagtttccagcaggtccggatatcgtttccacc
acaaccattgaaatcccgtactcatatacgttggatgcggcgaagtgtgtcaaagacatt
gtcacctccctggccggggataaccgtaatctggcggtatcggctggtgactgccaagtg
gattccggtgatgattctgacagtactgtgaccccgtcaattacattaagtgccaagctg
aatgataacaatgaggtgcagctaaactgggatattaccgatgccagtgtggctgggctg
cagctttatcgggatgtcgattcaaatcccgacggccgggagcgacttgttttgttatca
gcagacagtcgaagctatctcgatacaacggttagcccgggtttgacttattattattgg
gtcaaggtcagccagacagagctatctgattttaattctgaggcggccagtgtcacgatc
cctgccatatcagatgattctggtgatggtcataataatgatggtaacgataacggcgat
ggatcctctgagggtaataacagcgataccaacgtacccgaaaccggcagttcagacaca
cagacagatagtgtttctgtcaaaatcaatggatcaggcacatttggcggcttaggcctg
ggcctgctgctgatgtttgcaatgatcagacgaaccggtcgttaa
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