Gynuella sunshinyii: YC6258_01434
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Entry
YC6258_01434 CDS
T03690
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YC6258_01434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsn03400
]
YC6258_01434
Enzymes [BR:
gsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
YC6258_01434
DNA repair and recombination proteins [BR:
gsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
YC6258_01434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
SIMR_N
Motif
Other DBs
NCBI-ProteinID:
AJQ93482
UniProt:
A0A0C5VFV6
LinkDB
All DBs
Position
complement(1406829..1407587)
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AA seq
252 aa
AA seq
DB search
MRLISWNVNGIRAVMKKDFLQSLETMKPDVLCLQETKAQDDQVIEALAELEGFHIYSNSA
VKKGYSGTAILSRTQPLSIKEDMGIEEHDQEGRVLAAEFDEYYLVTVYTPNSGGELKRLG
YRQHWDKAFLQYLQQLETHKPVIVCGDFNVAHQPIDLARPKANYNKNAGYMQEEIDGMDQ
YIASGFLDTFRYKNADQVKYSWWSYRGGARAKNVGWRIDYFLCSEILGTKIKQADILNDI
HGSDHCPVLLEL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagactgatttcctggaacgtaaacggcattcgggccgtgatgaaaaaggactttctg
caatcgctggagaccatgaaacctgacgtactgtgtctgcaggaaaccaaagcccaggac
gatcaggtgatcgaagcgctggcagaacttgaaggcttccatatttacagcaactcagcg
gtcaagaagggttattccgggacagccatcctgagcagaacccaacccttaagcattaaa
gaggatatgggaatcgaggagcatgatcaggaaggacgggtactcgctgctgaatttgac
gagtattatctggtcaccgtctataccccgaactccggtggcgaactgaaacgtctgggg
tatcgtcaacactgggacaaagcatttttgcaatacctgcagcaactggaaactcacaaa
ccagtcatcgtctgcggcgatttcaacgttgcccaccaaccgatcgatcttgcccgcccc
aaagccaactacaataaaaatgccggttatatgcaggaagaaatcgacggtatggatcaa
tacatcgcatccgggtttctggataccttccgctacaaaaatgcggatcaggttaaatac
agctggtggagttatcggggcggagccagagccaagaacgtcggctggagaatcgattat
tttctgtgttcagaaattctgggtacaaaaatcaaacaggctgatatcctgaacgatatt
catggatccgatcattgcccggtactgctggagctttag
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