KEGG   Gynuella sunshinyii: YC6258_03234
Entry
YC6258_03234      CDS       T03690                                 
Name
(GenBank) signal recognition particle GTPase
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
gsn  Gynuella sunshinyii
Pathway
gsn02024  Quorum sensing
gsn03060  Protein export
gsn03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gsn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    YC6258_03234
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YC6258_03234
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    YC6258_03234
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gsn02044]
    YC6258_03234
Enzymes [BR:gsn01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     YC6258_03234
Secretion system [BR:gsn02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   YC6258_03234
  Eukaryotic Sec-SRP protein
   YC6258_03234
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW APS_kinase ParA nSTAND3 AAA_31 ArsA_ATPase AAA_33 AAA_16 Peptidase_C23 Thymidylate_kin AAA_19 6PF2K AAA_25 KTI12 YqeC Helicase_RecD ResIII AAA_14 DO-GTPase1 PALP AAA_24 AAA_30 TsaE
Other DBs
NCBI-ProteinID: AJQ95270
UniProt: A0A0C5V796
LinkDB
Position
3335405..3336799
AA seq 464 aa
MFKNLTERLNQTLKAIKGQAKLTEDNIKDTLREVRMALLEADVALPVVKDFINRVKDRSL
GAEVSQALNPGQQFIKIVHSELVHVMGDDNVSLDLASQPPVVLLMAGLQGAGKTTSTAKL
ARYLSEREKKKVMVVSADVYRPAAIKQLETLAAEVGALFFPSSADQKPIDIANAAIEAAR
KQYVDVLILDTAGRLAIDQAMMAEIKELHQAVEPKETLFVVDAMTGQDAANTAKAFADAL
PLTGVILTKADGDARGGAALSVRQITGKPIKFTGIGEKTDALEPFYPDRMASRILDMGDI
LSLIEEVERKVDKQKAEKLARKIQKGKGFDLQDFRDQLSQMNNMGGLMGMMDKLPGMGSM
GQMANQMVGAEKQMSQMAAIIDSMTPVERHWPDKINGSRKRRIALGSGTQIQDVNRVLKQ
HKQMQKMMKKVGTKGGMAKMMRGMKGMMPGGGGLPPGGMPPFGR
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgttcaagaatctgaccgaacgcctcaatcaaacattaaaagccattaagggccaagcc
aagctcaccgaagacaatatcaaggatacgttgcgcgaagtacgcatggcgttattggaa
gctgatgttgctttgcccgtggttaaagactttataaacagagttaaagaccggtctctg
ggggcggaagtatcccaggcactgaaccctggccagcagtttatcaagattgttcattct
gaattggttcatgtgatgggggatgacaatgtctccctggatttggcatcgcaacctcca
gtggttttactgatggcaggtttgcagggggctggtaaaacaacctcgactgccaagctg
gcgcgttatttgagtgagcgggaaaaaaagaaagtaatggttgtatctgccgacgtgtac
cggccggcggcgattaaacaactggagaccctggcagctgaagtcggggcgctgttcttt
cccagcagtgcagatcaaaaacctattgatattgccaacgcggcgatagaagctgcccga
aaacaatatgtcgatgtgctgattctggatactgccggacggttggcgatcgatcaggca
atgatggctgagatcaaggaactgcaccaggcggtggagcctaaagaaaccctgtttgtg
gtcgatgccatgaccggtcaggatgcggccaatactgctaaagcttttgcggatgcgctg
cctttaactggggtgattctgaccaaagccgacggtgatgcccgtggtggtgcagcttta
tcagtcaggcaaattactggtaaacccatcaaatttactggtattggtgaaaaaaccgat
gcactggaaccattttatcctgatcgaatggcatcccgaattctcgacatgggtgatatt
ctttctctgatcgaggaagtcgagcgcaaggtcgataaacaaaaagccgaaaaactggcc
agaaaaattcagaaaggcaagggttttgacctgcaggactttcgtgatcagctgtcgcaa
atgaataatatgggcgggctgatggggatgatggataagcttccaggaatggggagcatg
gggcaaatggccaatcagatggtcggtgcggaaaaacaaatgtcacaaatggcggcaatt
attgattccatgaccccagtggagcggcactggccggacaagatcaacggttccagaaaa
cgtcgtattgctttgggctccggtactcagatacaggatgtaaacagagttctaaagcag
cataaacagatgcagaagatgatgaagaaagtgggtacaaagggcggcatggcaaaaatg
atgcgtggaatgaaaggaatgatgcccgggggaggtggattgccgcctggtggaatgccc
ccatttggacgttag

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