Gynuella sunshinyii: YC6258_03852
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Entry
YC6258_03852 CDS
T03690
Name
(GenBank) bacterial nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
gsn
Gynuella sunshinyii
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsn03032
]
YC6258_03852
03036 Chromosome and associated proteins [BR:
gsn03036
]
YC6258_03852
03400 DNA repair and recombination proteins [BR:
gsn03400
]
YC6258_03852
DNA replication proteins [BR:
gsn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YC6258_03852
Chromosome and associated proteins [BR:
gsn03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
YC6258_03852
DNA repair and recombination proteins [BR:
gsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
YC6258_03852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AJQ95888
UniProt:
A0A0C5VR55
LinkDB
All DBs
Position
complement(4172985..4173275)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIERIVERQNQLSVKDVELAIKTMLDHMAQTLASGERIEIRGFGSFSLHYRSPRL
GRNPKTGESVDLTGKFVPHFKPGKELRDLVNAHIEE
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaactcatcgaacggattgtcgaaagacaaaatcagttatcggtaaag
gatgttgaacttgccataaaaaccatgttggatcatatggcacaaacactggcaagcgga
gagcgtattgagatacgcgggtttggcagtttttcattgcattatcgttctcccaggtta
ggtcgtaatcctaaaacaggggagtccgtagatttgactggtaagtttgtaccgcatttt
aaacccggtaaagaattgagggatctggtaaatgcccatatcgaagaatga
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