Gynuella sunshinyii: YC6258_03930
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Entry
YC6258_03930 CDS
T03690
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
gsn
Gynuella sunshinyii
Pathway
gsn02020
Two-component system
gsn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YC6258_03930
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YC6258_03930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsn03021
]
YC6258_03930
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gsn02035
]
YC6258_03930
Transcription machinery [BR:
gsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YC6258_03930
Bacterial motility proteins [BR:
gsn02035
]
Flagellar system
Flagellar assembly proteins
Stator
YC6258_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
GerE
Phage_terminase
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AJQ95966
UniProt:
A0A0C5VNT0
LinkDB
All DBs
Position
complement(4247588..4248340)
Genome browser
AA seq
250 aa
AA seq
DB search
MTVITYGPAMYETAHQSLEQLVTEHATLVKRIAHHLKARLPESVQVEDLIQSGMLGLFEA
ARNYDRSKGATFETYAGIRIRGSMLDEVRKGDWVPRSVHRNSRRISEAIHNVEARVGRDA
SDQEIAEELGVELNEYYSLLQDTQGSKLFSYEDLLDQNQPAETGYEHSPQPLQSSGTPDS
QVEQHLMRSHLIEAIKSLPEREQLVLSLYYDEELNLKEIGEVLGVSESRVSQIHSQAANR
LKARLRGWIG
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgactgtcattacctatggtccggccatgtacgaaacggcacatcaaagtttagagcag
ctggtgacagagcatgccactctggtgaagcgaattgctcatcatctgaaagccaggtta
cctgaaagtgttcaggttgaagacctgatccagagcggtatgctgggtctgtttgaggcg
gccagaaactatgatcgcagcaagggcgcgacattcgaaacctatgcaggtattcgtatt
cgtggctccatgctggacgaagttcgtaaaggtgactgggttccgagaagtgtgcatcgt
aattcgcgcagaatctcggaggcgattcataacgtcgaggcccgggtgggccgggatgca
tcggaccaggaaatcgcagaagaactgggtgtcgagttgaatgagtactattcgttactt
caggatacccagggatcaaaattattcagttatgaagatctgctggatcagaatcagccg
gctgaaaccggttatgaacattcacctcagccacttcaaagctctggaacaccggattca
caggttgaacagcatctgatgcgtagtcacctgattgaggcgatcaaaagtcttcctgag
cgggagcagttggtgctgtcgctgtactatgatgaagaattgaacctcaaggaaattggt
gaggtactgggagttagcgagtcccgtgtcagtcagattcattctcaggctgccaaccgt
ttgaaagcgaggctgcgggggtggattggttaa
DBGET
integrated database retrieval system
