Gynuella sunshinyii: YC6258_04247
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Entry
YC6258_04247 CDS
T03690
Name
(GenBank) succinate dehydrogenase/fumarate reductase, flavoprotein subunit
KO
K00244
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn00020
Citrate cycle (TCA cycle)
gsn00190
Oxidative phosphorylation
gsn00620
Pyruvate metabolism
gsn00650
Butanoate metabolism
gsn00720
Other carbon fixation pathways
gsn01100
Metabolic pathways
gsn01110
Biosynthesis of secondary metabolites
gsn01120
Microbial metabolism in diverse environments
gsn01200
Carbon metabolism
gsn02020
Two-component system
Module
gsn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gsn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gsn_M00150
Fumarate reductase, prokaryotes
gsn_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YC6258_04247
00620 Pyruvate metabolism
YC6258_04247
00650 Butanoate metabolism
YC6258_04247
09102 Energy metabolism
00190 Oxidative phosphorylation
YC6258_04247
00720 Other carbon fixation pathways
YC6258_04247
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
YC6258_04247
Enzymes [BR:
gsn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YC6258_04247
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
Thi4
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AJQ96281
UniProt:
A0A0C5VPY6
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All DBs
Position
complement(4581390..4583165)
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AA seq
591 aa
AA seq
DB search
METIQADIVIVGAGGGGLRAAIAAAEKNPSLTIALVSKVYPMRSHTCAAEGGCAAVVQDH
DSLDYHFADTVSGGDWLCDQDVVDYFVSHATEENLRLEHWGCPWSRKPDGRVNVRAFGGM
KIERTWFAADKTGFHILHTLFQTSIKFPQIKRYDEYFCTDLLVKDGRAVGLQAIDIKNGT
FTTFQAKAVIIATGGAGRVYRFNTNGGIVTGDGMSLAYRQGVPLRDMEFVQYHPTGLPGT
GILMTEGCRGEGGILTNKDGYRYLQDYNLGPETPVGQPKNKYMELGPRDRLSQAFWHEEK
KGRVIETSRGTAVNLDLTHLGEQKINERLPFIRELSKAYVGVDPVTAPIPVRPTVHYTMG
GIQTDINTETPIKGLFAVGECASVGLHGANRLGSNSLAELGVFGKVAGDHAADLASQADL
VDISDLQEQIQGNAARWNALRTAKGTESMADIRKELADTMEDGVGIYRSDDLIQKTCDKL
VELKDRYKNIGMKDGSLAFNTEWLYAIELGFLLDVGEAMAHSARARKESRGSHQRLDGFE
KRDDDKFLKHTLAYRSEDAAPKLEYQDVVITKSKPAERVYGAASEQKEGDK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaatccaagcagatattgtaattgtcggagccggtggtggaggtttacgagca
gcaatcgccgctgctgaaaaaaatccttcgttgactattgctctggtgtcgaaggtttat
cccatgcgcagtcatacctgtgcagcagaaggaggttgtgctgccgtagtgcaggaccat
gactcactggattatcactttgccgacacggtttcaggtggtgactggttatgtgatcag
gatgttgtggattattttgtcagtcatgccacagaagaaaacttacgcttggagcactgg
ggatgtccctggagccggaaacctgatggtcgggtaaatgtccgtgcgtttggtggtatg
aaaatagaacgtacctggtttgctgcagataaaaccggctttcatattcttcacacgctg
tttcagacttcgattaaatttccccagattaaacgctacgacgaatatttttgcactgac
ctgctggtgaaagacggccgtgcggttggtttgcaggctatcgatatcaagaatggcacg
tttaccaccttccaggccaaggcggtcattattgctaccggtggtgccggacgggtttat
cggtttaataccaatggtggcattgtcactggtgatggtatgtctctggcgtatcgtcag
ggggtgccattgcgcgacatggagtttgttcagtatcacccgaccggtcttcccggtaca
ggtattctgatgacagaaggatgccgtggtgaaggtggtattctgactaacaaagacggt
tatcgttatcttcaggattataacctgggtccggaaactccggttggtcagccaaaaaac
aaatatatggagttgggaccgcgtgaccgtctcagtcaggctttctggcatgaagagaaa
aaaggtcgggtcatcgaaacctcacgtggtacagccgtcaatcttgatctgactcatctg
ggtgaacagaaaatcaacgaacggttaccgtttattcgtgaactgtcaaaagcctacgtg
ggtgtggatccggtgactgcacctattcctgtacgtccaactgtgcactacaccatgggt
ggaattcaaacagacattaatactgagacccctatcaaaggcttatttgccgtgggtgag
tgcgccagtgtaggtttgcatggtgccaatcgcctgggttccaactcactggcagaactg
ggtgtgttcggtaaagtagccggtgatcatgccgcagatcttgccagccaggctgacctg
gtcgatatcagcgacttgcaggaacagatccagggtaacgctgcccgctggaatgctttg
cgcacagccaaaggcaccgaaagcatggctgacatccgtaaagagctggctgataccatg
gaagatggtgtgggcatctaccgctctgatgatctgattcaaaaaacctgtgacaagctg
gttgagttgaaagatcgctataaaaatatcggcatgaaggatggcagtctggccttcaat
accgaatggctgtatgccattgagctgggtttcctgttggatgtgggcgaagcgatggcg
cattctgccagagcccgtaaagaatcccgcggcagccatcagcgtcttgatggtttcgaa
aaacgtgatgatgataagttcctgaaacataccctggcttatcggtccgaagatgcggca
cccaaactggaataccaggatgtggtgatcaccaagtccaaaccggccgaacgtgtctat
ggagcagcgtctgaacagaaagagggggacaaataa
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