Gynuella sunshinyii: YC6258_04453
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Entry
YC6258_04453 CDS
T03690
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
gsn
Gynuella sunshinyii
Pathway
gsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YC6258_04453
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsn02000
]
YC6258_04453
Transporters [BR:
gsn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YC6258_04453
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
SBP_bac_5
DUF5953
Motif
Other DBs
NCBI-ProteinID:
AJQ96485
UniProt:
A0A0C5VAW3
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All DBs
Position
complement(4780006..4781514)
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AA seq
502 aa
AA seq
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MLKNIKLAFLTTGMVLSMAGSLAHAEVLTIGRGEDSTTFDPINSTQNADNWVFSNIFDPL
IRIDKTGTRLIPGLAESWTISDDGKTYVLKIRDAAFSDGTQVTAEDAAFSLLRIRNDEKS
LWADSYQVMDSVKAVDDKTLEIHLSAASVPFLSQLALPNASILPKQYFERVGEAVFAEKP
IGSGAFMLTKWNRGESVVLAKNPYYWESGRVHLDGVTWLTIPDSNTRMLKIQAGEIDAAI
NVPFSRISSLQADSDLTVHLDPSTREDHLLINHEHAPLNDVRVRQALDYGINKQSIIDIV
TFGYGTIANSYIPMGALYHNDLNLSRTYDPEKAKALLKQAGVHDLTLNYIVNAGDEVDEQ
IAILLQQQLAQIGVRANLTKVDPSQSWDMLVDGDYDISVMYWTNDILDPDQKTTFVLGND
ANMNYMTRYNNPQVTKLVEQGRLETDPAKREVIYMELQKIAKEEVNWVDLYYSPYRNVTR
KNITGFYQNPLGRFFLEDTEKK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaacataaagctcgcatttctgaccacaggaatggttctgtccatggccggc
agcctggcccatgcggaagtattgaccattggtcgaggtgaagacagtacgacctttgat
cccatcaactcaacccaaaatgccgataactgggtattttccaatatatttgacccgctg
attcgcatcgataaaaccggtaccaggctgattcccgggctggcggagagctggacgatt
tcagatgatggaaaaacctatgttctgaaaatccgcgatgcggcattctcggatggcact
caggtgacagcagaagatgctgctttcagtctgctgcgcattcgtaatgacgaaaaatct
ctgtgggctgactcctatcaggttatggacagcgtcaaagccgtggatgacaaaaccctc
gaaattcatttgtccgccgcatcggttccatttctttcgcaattggcgctgcccaatgcg
tcaatattgccaaaacagtattttgagcgggttggcgaagcagtatttgctgaaaagccc
attggttcgggagcgttcatgctgaccaaatggaatcgcggtgaaagtgttgtactggcc
aaaaatccatactactgggaatcaggaagagttcatttggatggtgtgacctggctgaca
attccagacagcaacacccgaatgctcaagattcaggcaggtgaaatcgacgctgcaatc
aatgtcccgttttcccggatcagttcattgcaggctgactccgatctgacggttcacctt
gatccatccaccagagaagatcatctgctcattaaccatgaacatgcaccactcaatgat
gtgcgggtgcgccaggcgttggattacggcatcaacaaacaatccatcattgatatcgtc
acctttggctatgggacaattgccaattcctacattcccatgggcgcgctgtatcacaat
gacctgaatctgtcccggacctatgatcctgagaaggccaaggctctgttgaaacaagcc
ggtgttcatgatttgactctgaattatattgtgaacgctggagatgaagtggacgagcag
attgccatattactgcaacagcaactggctcagattggtgtcagggcgaaccttaccaaa
gtcgatccgagtcagagttgggatatgctggtggatggtgattacgacatttctgtcatg
tactggaccaatgacatcctcgatcccgatcagaaaaccacgttcgttctcggcaatgat
gccaacatgaattacatgacccgctacaacaaccctcaggtaaccaaactggtagaacag
gggcgcctggaaaccgacccggccaaacgggaagtcatctatatggaattgcagaaaatt
gccaaagaagaggtcaactgggttgatctgtactacagtccttatcgtaacgtgacccgg
aaaaatatcactgggttttatcaaaatcctctgggacgttttttccttgaggacacagag
aaaaagtaa
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