Gynuella sunshinyii: YC6258_05244
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Entry
YC6258_05244 CDS
T03690
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gsn
Gynuella sunshinyii
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsn03016
]
YC6258_05244
Enzymes [BR:
gsn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
YC6258_05244
Transfer RNA biogenesis [BR:
gsn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YC6258_05244
Prokaryotic type
YC6258_05244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AJQ97274
UniProt:
A0A0C5W3T4
LinkDB
All DBs
Position
complement(5665941..5666858)
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AA seq
305 aa
AA seq
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MSRKRKGNPIHGVVLVNKPAGQSSNAVLQQVKRYYQAQKAGHTGALDPLATGLLPVCLGE
ATKFSQLLLDSDKTYQTTAVLGVRTDTCDADGQVVEEKDIPADVTTEKLQALIAEHLTGG
IQQVAPLYSALKVNGRPMYELARAGVEVEAKIRPVTIFRFEVLAVHERTIDLEIHCSKGT
YIRSLVDELGQLLGCGAHVSRLHRIQHGPYQLQDAVRLEQLQQFVPEQLQEQLLPVDSMI
TQWPIVWLTEDQVIRFCHGNPVSYPDMPEMQTAQIRVYDQQAQKMIGIGRAENGLIKPVR
LINWD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtaagcgtaaaggtaatccgatacatggtgtggtgttggtcaacaagccggca
ggccagagttccaacgccgtactgcagcaggtcaagcgatactatcaggcgcagaaagca
ggccatacaggggcgcttgatcctttggccacggggttgttgcccgtatgtcttggtgaa
gccaccaagttttcccagttgctgctcgacagtgacaaaacctatcaaaccaccgcagta
ttgggagtcagaacagatacctgtgatgccgacggccaggttgtggaagaaaaagatatt
cccgctgatgtgaccaccgaaaaactacaagcactcattgctgagcatctgaccggtggt
attcagcaggttgctccgctctattctgcgttaaaggtgaatgggcggcctatgtatgag
cttgccagagcgggtgtcgaggtagaggctaaaatcaggcctgtgaccatattccggttt
gaggtgttggccgttcatgaacgaacgattgatcttgagattcattgcagcaagggaacc
tatattcgcagtctggtcgatgaactcggtcagctattaggctgcggagcccatgtatcc
cgtttacaccgaatccagcatggcccctaccagttgcaggatgcagttaggttggaacaa
ttacaacagtttgtaccagaacaattgcaggagcagctgttgcccgtcgatagcatgatt
acccaatggcccatagtatggttgacggaagatcaggtgatacgtttctgtcatgggaat
cctgtgagctatccggatatgcctgaaatgcagactgcacagatccgcgtatatgaccag
caggcgcagaaaatgataggtatcggacgggctgaaaatggtttgatcaaaccagtacgc
ttaattaactgggattaa
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integrated database retrieval system
