Gynuella sunshinyii: YC6258_05334
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Entry
YC6258_05334 CDS
T03690
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gsn
Gynuella sunshinyii
Pathway
gsn03030
DNA replication
gsn03430
Mismatch repair
gsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YC6258_05334
03430 Mismatch repair
YC6258_05334
03440 Homologous recombination
YC6258_05334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsn03032
]
YC6258_05334
03400 DNA repair and recombination proteins [BR:
gsn03400
]
YC6258_05334
Enzymes [BR:
gsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YC6258_05334
DNA replication proteins [BR:
gsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YC6258_05334
DNA repair and recombination proteins [BR:
gsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YC6258_05334
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AJQ97364
UniProt:
A0A0C5W416
LinkDB
All DBs
Position
5776142..5776801
Genome browser
AA seq
219 aa
AA seq
DB search
MLMARLRSQFFNRTLNTIHHELWNNQKYLVLDMETTGLNVATDHLLSLGWVAIDDGIIKL
STAQLLLVNHGAVSKDTVGLHMITDQDINDQGIPVKTALEYLYQALQGRLLIVHHAPVEI
GFLTRLWRQIALPSLQINLFDTLLFERIQKNKIQEYVRDDAFRLNNCRRRYNLPEYGGHN
ALTDALATAELFLAQVAHIRAEPTIGYLFKNAGLTIRLP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggcacgtctgcgttcgcagttcttcaaccgaactctgaatactatccaccac
gaactatggaacaatcagaagtatctggtgctggacatggaaacgaccggactcaacgtt
gcaaccgatcacctgttaagcctgggctgggttgcgattgatgatgggatcatcaagctt
tcaacagcacaattgctactcgtcaatcatggtgcggtatccaaagataccgttggtctg
cacatgattactgatcaggatatcaacgaccagggaataccggtcaaaaccgcactcgaa
tacttgtatcaggctcttcagggacgtttactgatcgtacatcacgcaccggtggagata
ggttttctgaccagactctggcgtcagatagccttaccttccttacagatcaacctgttt
gatactctgttgtttgagcgcatccagaaaaataaaattcaggaatatgtgcgcgacgat
gccttccggctgaacaactgccgcagacgttataatctgccggaatacggggggcacaat
gctttgacagatgcattggcaacggcagagttgttccttgcacaggttgctcatatcaga
gcagagcctaccataggctacttatttaaaaatgccggtctgaccatccggctgccctga
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