Gynuella sunshinyii: YC6258_05950
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Entry
YC6258_05950 CDS
T03690
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
gsn
Gynuella sunshinyii
Pathway
gsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YC6258_05950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsn02000
]
YC6258_05950
Transporters [BR:
gsn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YC6258_05950
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AJQ97974
UniProt:
A0A0C5W5U5
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All DBs
Position
complement(6457411..6459342)
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AA seq
643 aa
AA seq
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MYNPVSVRAWRSVRAIIFPLMAGLACSVAGAGEAPEFAAKVAAGELPALPDRLPEQPLVM
TPIERVGVYGGTWRAALKGGADHVHLIRTIGYDGLVSWNPDWSAAIPGLATQWQANADAT
EYTFTLRKGAKWSDGTPFTSEDVRFAIEDMEGNSEFYPSPFRWLTANDELVKVTVIDDAT
FKLTYAAPNGFLIQRLATGEGVDLVNYPAHYCKQFHPKYNANANAEAKAAGFQSWGERMK
VMCDRANEIGRWQNPDKPTMMAFMSVEPYLGDSKQLNFVRNPYYWKVDTAGNQLPYLDGV
QFTVAESAEDIVFRALNGEIDLQDRHISSLSLKPVFYDGQEKGHFHFYDLLPSQSNAQVI
ALNLNHPDPTKRALFQNKDFRIALSEAINRPEINDAIYLSQTKPYQVGPRPESEFYNEQL
ATQYTRFDPDKANQLLDRVGLKQRNKDGIRLMENGKPVQISVDVVAAIFPFWIDTLELVQ
KYWRDVGIDLKINTVDRTIFYETRRANQHDAQVWAGDAGAGVDVMLDPRWLFPYSDESIF
AIRWQAWFNDPTQPLAEEPPAQVKQQMALYRQLTQIADPKQQAELMHRIVDMAADEFYVM
GIVLSPNLFGIQSDRLHNVPNAMPAAWNYPNPAPVGVAQFFMQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtataaccctgtatctgtaagggcctggcgatctgtccgggcgatcatttttccactg
atggccggtctggcctgctccgtagccggtgctggtgaagcgccggaatttgccgccaaa
gtcgcagccggtgaattaccggccttgccggatcgtttacccgaacaaccactggtaatg
accccgatcgaacgggtgggtgtctatggtggaacctggcgggcagcgctcaagggcggt
gccgatcatgtgcatctgatcagaaccatcggttacgatggcctggtcagctggaatccg
gactggtcggccgccattcccggtctggccactcaatggcaggccaatgcagatgccacg
gaatatacctttaccctgcgcaaaggcgccaaatggtccgacggtacgccgttcacctca
gaagacgtgcgttttgccattgaagatatggaaggtaactcagaattttatccgtctccg
ttccgctggctgacggccaacgatgagctggtcaaagtgactgtgatcgatgatgccacc
ttcaaattgacctatgccgcgccaaatggctttttgattcagcggctggcgaccggcgaa
ggggtcgatctggtgaattatccggcccactactgcaaacagttccatccaaaatacaac
gccaatgccaacgctgaagccaaagccgccggttttcagagttggggtgagcgcatgaag
gtgatgtgtgatcgtgccaatgagattggtcgctggcagaacccggacaagccgaccatg
atggcgtttatgtcggtggaaccctatctcggtgacagcaaacagctgaactttgtgcgc
aatccgtattactggaaagtggataccgccggcaatcagctgccctatctcgatggcgtg
cagttcaccgtggccgaaagtgccgaggatatcgtgttccgtgccctcaatggtgagatc
gatctgcaggaccggcacatttcttctttatcgttgaagccggtgttttacgatggtcag
gaaaaaggtcattttcatttttacgatctgctgccgtcgcaatccaatgctcaggtcatt
gctcttaacctgaatcatcctgatccgaccaaacgggcactgttccagaataaggatttt
cgcattgccctgagcgaggcgattaaccggcccgagatcaatgacgcgatttatctgagt
cagaccaaaccctatcaggtagggccacggccggaatccgagttttataacgagcaactg
gccactcagtacactcggtttgatcctgacaaagccaatcagctgctcgatcgtgtgggc
ctgaaacaacgcaataaggacggcatccggctgatggaaaacggcaaaccggtgcagatt
tctgtagatgtggtcgccgccattttcccgttctggatcgataccctggagctggtgcaa
aaatactggcgcgatgtcggcatcgatttgaagatcaataccgtggaccgcaccattttc
tatgaaacccgccgcgccaatcagcacgatgcccaggtctgggccggtgatgccggtgcc
ggtgtggatgtcatgctggacccgcgctggctgttcccctattccgatgaatcgatcttc
gccatccgctggcaggcctggtttaacgatccgacccaaccactggctgaagagccgccg
gcccaggtcaaacaacagatggcgctgtatcggcaactgacccagatcgctgatcccaaa
caacaggccgaactcatgcaccggattgtggatatggccgccgatgagttttatgtcatg
gggattgtgctgtctcccaatctgttcggtattcagtccgatcgtctgcataacgtgccc
aacgcaatgcctgctgcctggaattacccgaatccggctccggtcggggtggcgcagttc
ttcatgcagtaa
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