Gimibacter soli: PH603_00465
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Entry
PH603_00465 CDS
T09793
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gso
Gimibacter soli
Pathway
gso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PH603_00465 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gso03019
]
PH603_00465 (pnp)
03016 Transfer RNA biogenesis [BR:
gso03016
]
PH603_00465 (pnp)
Enzymes [BR:
gso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PH603_00465 (pnp)
Messenger RNA biogenesis [BR:
gso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PH603_00465 (pnp)
Transfer RNA biogenesis [BR:
gso03016
]
Prokaryotic type
tRNA degradation factors
PH603_00465 (pnp)
BRITE hierarchy
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
WCL54230
LinkDB
All DBs
Position
complement(104345..106546)
Genome browser
AA seq
733 aa
AA seq
DB search
MFNIHRKEITWGGRKLVLETGHVARQADGAVMATYGDTTVLCTVVGAKSMKPGQDFFPLT
VNYQEKYFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFIDGFKNEVQVVCTVLSH
DLENDSDIVAMVGASAALTLSGLPFMGPIAGAKVGYKDGKYILNPTTEEVKESDLELVVA
GTSEAVLMVESEAKELSEEVMLGAVMFGHAEMQPVINAIIELAEAAAKDPWELPEPADLS
AVVARIKSVAEADLRAAYGIITKQDRVKAIKAAKEKVFADLAEEIESNDALSATVVGDLL
KALESDIVRNSILDTKKRIDGRDLDQVRPIVSEVGILPRTHGSALFTRGETQGLVVATLG
TGEDEQIIDALEGSYRSAFMLHYNFPPYSVGECGRMGGAGRREIGHGKLAWRAVQAVLPE
KEAFPYTIRIVSEITESNGSSSMASVCGASLSMMDAGVPITRPVSGIAMGLIKEGDRFAV
LSDILGDEDHLGDMDFKVAGTDAGITALQMDIKITGITKEIMEVALNQAAGGRAHILAEM
SKALTGARGELSAHAPRIETMKIPTDKIREVIGTGGKVIREIVEVTGAKVNIEDDGTIKI
ASSDAAQIEAAKNWIIGIVAEPEVGKIYHGKVVRIMEFGAFVNFMGSRDGLVHISELKED
RVEKVTDVVNEGDMVYVKCLEIDGKGKVRLSMRVVNQETGEEDPNARPAKAAPSGDRGDR
GDRGERRPRRDRD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacattcatcgcaaagaaatcacctggggcggtcgcaagctcgttctggaaacc
ggccatgttgctcgccaggccgatggcgccgttatggcgacctatggcgacaccaccgtc
ctctgcaccgttgtcggtgccaaatcgatgaagccggggcaggactttttcccgctcacg
gtaaactaccaggaaaaatacttcgctgccggcaagatccccggcggcttcttcaagcgc
gaaggccgtccgaccgagaaagaaaccctcgtgtcgcgcctcatcgaccgcccgatccgc
ccgcttttcatcgatggcttcaagaacgaagtgcaggttgtctgcaccgtgctcagccac
gaccttgaaaacgacagcgacatcgtcgccatggttggcgcgtctgctgccctcaccctt
tccggcctgccgttcatgggcccgattgctggtgccaaggttggttacaaggatggcaaa
tacatcctgaacccgacgaccgaagaagtgaaagaaagcgacctcgagcttgtggttgcc
ggtacttcggaagccgttctgatggtggaatcggaagcaaaagagctttccgaagaagtc
atgctcggcgccgtcatgttcggtcacgccgaaatgcagccggtgatcaatgcgatcatc
gagcttgctgaagctgccgccaaagacccgtgggaactgccggaaccggctgacctgtcg
gctgttgtcgcgcgcatcaaatcggttgccgaagctgatctccgtgccgcttacggcatc
atcaccaagcaggaccgcgtgaaggcgatcaaggctgcgaaagagaaagtcttcgcggac
ctcgccgaagagatcgaatcgaacgatgccctttcggcaaccgttgtcggcgatctcctc
aaagcgctcgagagcgatatcgttcgtaactcgatcctcgacaccaagaagcgtatcgac
ggccgcgatctcgatcaggttcgcccgatcgtttccgaagtcggtatcctgccgcgtacc
cacggttcggcgctcttcacccgcggtgaaacgcagggcctcgtggttgccaccctcggc
accggcgaagacgagcagatcatcgacgcacttgaaggcagctaccgctcggccttcatg
ctgcactataacttcccgccctactcggtgggtgagtgcggccgcatgggcggcgccggt
cgccgcgaaatcggccacggcaagctcgcatggcgcgctgttcaggcagtgctccccgag
aaggaagccttcccctacacgatccgtatcgtgtcggaaatcaccgaatcgaacggttcg
tcctcgatggcatccgtttgcggtgcttcgctctcgatgatggatgccggcgtgccgatc
acccgtccggtttcgggtatcgccatgggcctcatcaaggaaggcgaccgtttcgcggtt
ctctccgatatcctgggtgacgaagatcacctcggcgacatggacttcaaggtagccggt
acggacgcgggcatcactgccctgcagatggacatcaagatcaccggcatcaccaaggaa
atcatggaagtcgcgctcaaccaggcagctggcggccgtgcccatatccttgccgagatg
agcaaggccctcaccggtgcccgcggcgagctttcggctcacgccccgcgcatcgagacc
atgaagatcccgaccgacaagatccgtgaagtgatcggcaccggcggcaaggtgatccgc
gagatcgtggaagtcaccggcgccaaggtgaatatcgaagacgacggcaccatcaagatt
gcctcttcggacgctgcacagatcgaagccgcgaaaaactggatcatcggcatcgtggct
gagcccgaagtcggcaagatctatcacggcaaagtcgtccgcattatggaattcggcgcc
ttcgtcaacttcatgggcagccgcgacggcctcgtccatatctcggaactgaaggaagac
cgtgtcgagaaggtcaccgatgtggtgaacgaaggcgacatggtttacgtcaagtgcctc
gagatcgacggcaagggcaaggttcgcctttccatgcgtgtcgtgaatcaggaaaccggc
gaagaagacccgaacgcgcgtccggccaaggctgccccttcgggcgaccgtggtgatcgt
ggcgaccgcggcgagcgtcgtccgcgccgtgaccgtgactaa
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