Gimibacter soli: PH603_00475
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Entry
PH603_00475 CDS
T09793
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gso
Gimibacter soli
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gso03016
]
PH603_00475 (truB)
Enzymes [BR:
gso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PH603_00475 (truB)
Transfer RNA biogenesis [BR:
gso03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PH603_00475 (truB)
Prokaryotic type
PH603_00475 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Sarcoglycan_1
Motif
Other DBs
NCBI-ProteinID:
WCL54232
UniProt:
A0AAE9XQ76
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All DBs
Position
complement(107093..107992)
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AA seq
299 aa
AA seq
DB search
MARRKKGEVVNGWVILDKPLGLGSTQAVSAVRRITNAQKIGHGGTLDPLASGILPIGMGE
ATKAMPYIVDASKDYDFTIRWGAETSTDDLEGEMTASNDVRPAEAEIAAILPRFTGSITQ
VPPAYSAIKIDGERAYARVRAGEEVEMPSRTVEIHALTLVSHNAEKGETMLSVTCGKGTY
IRALGRDIARALGGHGHLGALRRTRVGPFSLESAISLEKLTELGHSAPASDYVLSIMTAL
DDIPALAVSEAEADRIRCGQQIRVSGHLSGLHVLTYGGTPLALATAAQGLMVLERVFNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgacgcaagaaaggcgaagtcgtcaacggctgggtgattctcgacaagcccctc
gggctcgggagcacacaggcggtttccgccgtgcggcgcattacgaacgcccagaagatc
ggccacggcggcacgcttgatccgctcgcctccggcatcctgcccatcggcatgggcgag
gcgacgaaggcgatgccctatatcgtcgatgcctccaaggactatgacttcaccatccgc
tggggggctgaaacctccaccgatgaccttgaaggcgaaatgacggcctcgaacgacgtg
cgcccggcggaagccgagattgccgccattctgccacgcttcaccggcagcatcacgcag
gtaccgcccgcctatagcgcgatcaagatcgatggcgagcgggcctatgcccgtgtgcgg
gccggtgaagaggtcgaaatgccctcgcgcaccgtggaaattcatgcacttacgcttgtc
tcccacaatgcggagaagggcgagacgatgctttccgtgacctgcggcaagggcacctat
atccgcgcgcttggccgcgatattgcccgcgcccttggcgggcatgggcaccttggtgcg
ctgcgccgtacacgggtcgggcccttttcgctggaaagcgcaatttcgctggaaaaattg
accgagctcgggcatagtgcgcccgcctcggactatgtcctttcgatcatgacggcgctg
gacgacatcccggcgcttgccgtgagcgaagcggaggctgatcgcatcagatgcggccag
cagatccgcgtgtccgggcacctttccgggctccatgtcctgacctatggcggtacaccg
ctggcgcttgctacggcggcgcagggtctcatggtgctggaaagggtgttcaatctctag
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