Gimibacter soli: PH603_02350
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Entry
PH603_02350 CDS
T09793
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gso
Gimibacter soli
Pathway
gso03030
DNA replication
gso03430
Mismatch repair
gso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PH603_02350 (dnaQ)
03430 Mismatch repair
PH603_02350 (dnaQ)
03440 Homologous recombination
PH603_02350 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gso03032
]
PH603_02350 (dnaQ)
03400 DNA repair and recombination proteins [BR:
gso03400
]
PH603_02350 (dnaQ)
Enzymes [BR:
gso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PH603_02350 (dnaQ)
DNA replication proteins [BR:
gso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PH603_02350 (dnaQ)
DNA repair and recombination proteins [BR:
gso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PH603_02350 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WCL54598
UniProt:
A0AAF0BHT5
LinkDB
All DBs
Position
493834..494502
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AA seq
222 aa
AA seq
DB search
MREIIFDTETTGFDPLTGDRVIEIGCVEMINKSLTGNNYHIYLNPRREVPESAVRVHGIT
TAMLADKPFFEDVVDDFLAYVGDDSILVAHNAEFDMKFINWEIENASRKIISPKRFKDTL
AIARVKFPGAGNSLDALCKRFGIENGHRTLHGALLDAEILADVYIELLGGRQAGLDLSVT
RTTTMVKRERVFREARSFAPSDEELAAHSAFVGKLKDAIWLK
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatcatcttcgataccgaaaccaccggcttcgatcccctcaccggggaccgg
gtgatcgagatcggatgcgtggagatgatcaacaaaagcctcaccggcaacaattatcac
atctatctgaacccgcgccgcgaagtgccggaatccgcggtgcgcgtgcacggcatcacc
accgcgatgctggccgacaagcccttcttcgaagacgtggtcgatgattttctggcctat
gtgggggatgacagcatccttgtggcccacaatgccgagttcgacatgaaattcatcaac
tgggagatcgagaacgcgtcgcgtaagatcatctcgcccaagcgtttcaaggatacactg
gcgatcgcgcgggtgaagtttccgggtgcgggcaacagccttgatgcgctttgcaaacgg
ttcgggatcgaaaacggccaccgcaccctgcacggcgcgcttcttgacgctgaaatcctc
gcggatgtctatatcgagcttctgggggggcgtcaggccgggcttgatctttccgtcacc
cgcaccaccacgatggtgaagcgcgaacgcgttttccgtgaggcacgttcttttgcaccg
agcgacgaagaacttgccgctcacagtgcgtttgtcggcaagctcaaggacgcgatctgg
ctcaagtga
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