Gimibacter soli: PH603_02490
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Entry
PH603_02490 CDS
T09793
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gso
Gimibacter soli
Pathway
gso03030
DNA replication
gso03430
Mismatch repair
gso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PH603_02490 (holA)
03430 Mismatch repair
PH603_02490 (holA)
03440 Homologous recombination
PH603_02490 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gso03032
]
PH603_02490 (holA)
03400 DNA repair and recombination proteins [BR:
gso03400
]
PH603_02490 (holA)
Enzymes [BR:
gso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PH603_02490 (holA)
DNA replication proteins [BR:
gso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PH603_02490 (holA)
DNA repair and recombination proteins [BR:
gso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PH603_02490 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HP_1247_M
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WCL54626
UniProt:
A0AAE9XQR4
LinkDB
All DBs
Position
522918..523940
Genome browser
AA seq
340 aa
AA seq
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MKVAPRDIEAVCRSLPAGVRVVLVYGRDEGLARERATRIGKQIAPDLSDPFQVARPDNAT
VKATPSLLVDEMSAISMLGGRRLVRLEGAGNDMTDAVKLVLADPRGDGLLLITAGDLDGG
SSLRKAVEGGKDALAIACYEDNARDLSGLVQEVLSAAGLRASRDAMAYLIENLGGDRAVS
RGELDKLVLYKGNDKSEITLDDARACVGDTAAFALHEIASAVTAGDMKKLETGLERAWIA
GESPIAILLLLSRRLMRLHYARALMTEQNLGPAEAVERLRPPVIFFEKPVFTADLARWTA
RKIEQALDILIEADLECKTTGNPAEVICARACLRLAKAAR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgcaccccgcgacatcgaagccgtttgccggtcgctgccggccggggttcgg
gtcgtgctggtgtatggccgggacgagggcctcgcgcgtgaacgcgccacccgcatcggc
aagcagattgcccccgatctttccgatcctttccaggttgcccgccccgataatgcgacg
gtgaaggccacgccgtcgcttctcgttgatgaaatgtcggccatctcgatgcttggcggg
cgccgccttgtgcgccttgaaggtgccggcaacgacatgacagacgcggtgaaactggtg
ctggccgacccgcgcggtgacgggcttctcctcatcacggcgggggaccttgatggcggc
tcgtcgctccgcaaggcggttgagggcggcaaggatgcgctcgccatcgcctgctatgag
gataatgcccgcgatctctcgggccttgtgcaggaagtgctgtccgctgccgggcttcgc
gccagccgcgatgcgatggcctatctgattgaaaacctgggcggggaccgtgccgtttcg
cgcggggagctcgacaagcttgtcctttataagggcaatgacaaaagcgagatcacgctg
gatgatgcccgcgcctgcgtgggcgacacggcggccttcgcactgcatgagattgcctct
gctgtgactgcgggcgacatgaaaaagctggaaacggggctggagcgcgcctggatcgcc
ggtgaaagccccatcgcgatcctcctgctgctctctcgccgcctgatgcgcctgcattat
gcgcgtgccttgatgacagaacagaatctgggccccgccgaagcggtggaacgcctgcgc
ccgcccgtcattttcttcgaaaaaccggtcttcaccgccgatctcgcccgctggaccgcc
cggaagatcgaacaggcgctcgatatcctcatcgaagccgatctcgagtgcaaaaccacc
ggcaacccggcggaggttatctgcgcccgcgcctgcctgcgcctcgccaaagcggcgcgg
taa
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