Gimibacter soli: PH603_04055
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Entry
PH603_04055 CDS
T09793
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gso
Gimibacter soli
Pathway
gso00300
Lysine biosynthesis
gso01100
Metabolic pathways
gso01120
Microbial metabolism in diverse environments
gso01230
Biosynthesis of amino acids
Module
gso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PH603_04055 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gso01002
]
PH603_04055 (dapE)
Enzymes [BR:
gso01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
PH603_04055 (dapE)
Peptidases and inhibitors [BR:
gso01002
]
Metallo peptidases
Family M20
PH603_04055 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WCL54930
UniProt:
A0AAF0BMR6
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All DBs
Position
844524..845660
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AA seq
378 aa
AA seq
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MIDPVALSQALIRQPSVTPDTGDGLDVLIRALEPLGFTCHRLVFEEEGEEAVANLYARIG
EGSPHLCFAGHTDVVPVGAHGQWSVDPFAADVKDGQLYGRGAADMKSAIAAFAAAVSRRL
ARGDLKGSISFLITGDEEGPAINGTRKVLDWLRARGEGIDFCVVGEPTNPQALGQMIKIG
RRGSLHGIIRVAGVQGHVAYPHLAHNPIPDLVKILSELTAEPLDQGNAHFQPSNLEVVNV
HVGNESHNVIPAEATARFNVRFSSDFTPDALQAELTRRMDRAGVKYAIDWWVSGDSFLTE
RGPLTDAVVAAVEAVTGQTPELSTTGGTSDARFIKDMCPVVEFGLVGATMHKIDEHVAVA
DIEALAKIYEGVIERLVG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgattgatccggttgcgctctcgcaagccctgatccgccagccgagcgtcacgcccgat
acgggcgacggccttgatgtgctgatccgcgcgctggagcccctcggcttcacctgccac
cggctggtgtttgaggaagaaggcgaggaagcggtcgccaacctgtatgcccgcatcggc
gagggtagcccgcatctatgcttcgccgggcataccgatgtggtgcccgtgggtgcgcac
ggccagtggtcggtcgaccccttcgcggcagacgtgaaagacggccagctttacgggcgc
ggggcggcggatatgaaatccgccatcgccgccttcgccgccgccgtttcgcggcgtttg
gcgaggggtgacctgaagggcagcatttccttcctcatcacgggggacgaagaaggcccg
gcgatcaatggcacccgcaaggtgctggattggctcagggcgcgcggcgagggcatcgat
ttctgcgtggtgggtgaacccacaaacccgcaggcgctcggccagatgatcaagatcggg
cggcgtggcagcctgcatggcatcatccgggtggcgggcgtgcagggccatgtggcctat
ccgcatctggcgcacaatccgatccctgatctggtgaaaatcctctcggagcttaccgcc
gaaccgctcgatcagggcaatgcgcatttccagccctcgaacctcgaggtcgtgaatgtg
catgtcggcaacgaaagccacaatgtgatccccgccgaggcgacggcgcgcttcaacgtg
cgcttttcgtccgatttcacgcccgatgccctgcaggcggaactgacccgccgcatggac
cgcgcaggcgtgaaatatgccatcgactggtgggtttcgggcgacagtttcctcaccgaa
cgcgggccgctgaccgacgccgtcgtggcggcggtcgaggccgtgacgggccagaccccg
gagctgtccaccaccggcggcacctcggatgcgcgcttcatcaaggatatgtgcccggtc
gtggaattcggcctcgtgggcgccaccatgcacaagatcgacgagcatgtggccgtcgcc
gacatcgaagccctcgccaagatttacgagggcgttatcgagcggctggtggggtag
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