Gimibacter soli: PH603_04215
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Entry
PH603_04215 CDS
T09793
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gso
Gimibacter soli
Pathway
gso00300
Lysine biosynthesis
gso00470
D-Amino acid metabolism
gso01100
Metabolic pathways
gso01110
Biosynthesis of secondary metabolites
gso01120
Microbial metabolism in diverse environments
gso01230
Biosynthesis of amino acids
Module
gso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PH603_04215 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PH603_04215 (lysA)
Enzymes [BR:
gso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PH603_04215 (lysA)
BRITE hierarchy
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WCL54962
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All DBs
Position
complement(872814..874073)
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AA seq
419 aa
AA seq
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MDHFNSRNGVMFAEDVDLRTIADAVGTPVYVYSSATLERHFNVFHEAFAPLDPLVCFAVK
ANSNQAVLATLAKAGAGADVVSGGELKRALAAGIAPEKIVFSGVGKTADEMRLALEAGIL
QFNIESEPELEALNAVAASLGVVAPVSVRVNPDVDAKTHAKISTGKAENKFGISWQKVDM
LYERMRTMANIKATGVDVHIGSQLTELEPFRAAFARVVELVKSLRAAGHDIHHIDLGGGL
GIPYDPDVAAPPAPAAYGALIRDVLAGLDCRIILEPGRLIAGNAGILLTRVLYEKIGDNR
TFYILDGAMNDLMRPAMYDAFHHIVPVEDQAGDSFAADFVGPVCESSDVFGTGRATKRLK
AGDLVAIKSAGAYGAVMSSTYNSRPLVAEVLVKGDAYAVVRPRVEVEDLIAMDKVPDWI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcaacagccggaacggcgtcatgttcgccgaagacgtggacctgcgcacc
atcgcggatgccgtcggcacgcccgtttatgtctattcatctgcgacgcttgaacgccac
ttcaacgtcttccacgaggctttcgcgccgcttgatccgcttgtctgcttcgccgtcaag
gccaacagcaaccaggcggtgctggcgaccctcgcgaaagccggtgcgggcgccgacgtt
gtatcgggcggcgaactgaagcgcgcgctggccgctgggatcgcgcctgaaaagatcgtc
ttttccggcgtcggcaaaaccgcggatgaaatgcgcctcgcccttgaggcaggcatcctg
cagttcaatatcgaaagcgaaccggagctcgaggccctgaacgccgtggccgcaagcctc
ggtgttgtcgcccccgtttcagtgcgggtaaacccggatgtggacgccaagacccacgcc
aaaatctccaccggcaaggctgaaaacaagttcggcatcagctggcagaaggtcgacatg
ctgtatgaacgcatgcggacgatggccaacatcaaggcaaccggtgtggacgtgcatatc
ggctcgcagctgaccgagcttgaacccttccgcgccgccttcgcgcgcgtggtcgagctt
gtcaaatcgctgcgggctgccggccacgatatccatcatatcgacctcggcggcggcctt
ggcatcccctatgaccccgatgttgccgccccgcccgcaccggcagcttacggcgccctc
attcgcgatgtgcttgccgggctcgattgccgcatcattctggaaccgggccgcctgatc
gcgggcaatgccggcatcctcctcacccgcgtgctgtacgagaagatcggcgacaaccgc
accttctatatcctcgacggagcgatgaacgacctgatgcgccccgccatgtatgatgcc
ttccatcatatcgtgccggtggaggatcaggcgggcgacagcttcgccgccgatttcgtg
gggcctgtttgcgaatcttcggacgtgttcggcaccggtcgcgccaccaagcgcctgaag
gccggtgaccttgtcgccatcaaatcggcaggcgcttacggcgccgtcatgtcatcgacc
tacaactcacggccgcttgtggccgaagtgcttgtaaagggtgatgcctatgccgtggtg
cgcccacgtgtcgaggtcgaagacctgatcgccatggacaaggtgccggactggatttga
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