Gimibacter soli: PH603_09340
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Entry
PH603_09340 CDS
T09793
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
gso
Gimibacter soli
Pathway
gso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PH603_09340 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gso03400
]
PH603_09340 (uvrA)
DNA repair and recombination proteins [BR:
gso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PH603_09340 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PH603_09340 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
BCA_ABC_TP_C
AAA_16
AAA_29
AAA_21
DnaJ_CXXCXGXG
AAA_25
nSTAND1
ATPase
AAA_15
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WCL52741
UniProt:
A0AAF0BL46
LinkDB
All DBs
Position
complement(1995435..1998302)
Genome browser
AA seq
955 aa
AA seq
DB search
MLTQISVRGAREHNLKSVDVDIPRDKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLELMQKPDVDHIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLWARVGIPY
SPATGLPIESQTVSQMVDRIIALGDGARLYLLAPIARGRKGEFKKELAELQKRGFQRVKI
DGEFYLIEEAPALDKKIKHEIEVVVDRLVIKEGLAQRLADSVETALELSDGLIIVEMADK
PADGEAPARHLMSAKFACPVSGFTIEEIEPRLFSFNNPYGACPTCDGLGNQLYFDPDLVV
PDHTKSLIDGAIAAWSNKLQNPSPFYFQALEAVAHHHGCDTRTPWSKLPEKAQKAILYGT
GNEAITIVYADGKRRFETRKPFEGVITNIERRWRETDSNWMREELSRYQAATTCSACNGA
RLKPEALAVKVGTSPISEISSLSVKAAHDWFTALPDQLTDKQQQIAAKVLKEIQDRLGFL
VNVGLSYLTLSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLET
LKNLRDIGNTVLVVEHDEDAIRVADYVIDMGPGAGEHGGTIVAEGTPAEVMANPKSMTGQ
YLTGARSVPIPAMRRTGHKGKKLTIKGATANNLKGATASIPLGTLTCVTGVSGSGKSTFT
IETLYKAVAKHLNGAREVPGAHDAIEGLQHLDKIVDIDQSPIGRTPRSNPATYTGAFTPI
RDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGMLKIEMHFLPDVYVECDQCKGKRY
NRETLEVRFKDKSISGVLDMTVEDGVELFKAVPAIRTKLEMLEKVGLGYIRVGQQATTLS
GGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDVRKLLEVLQALVDQGNTVVVIEHN
LEVIKTADWIIDLGPEGGDGGGEIVAVGTPEEVADNPRSYTGQYLAPVLARVAAE
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccaaatttccgtccgcggtgcgcgtgaacacaatctgaaatccgtcgatgtg
gatatcccgcgcgacaaactggtggtgatcaccggcctttcaggctccggcaagtcctcg
ctggcgttcgatacaatctatgccgaaggccagcgccgctatgtggaaagcctgtcggcc
tatgcccgccagtttctggaactgatgcagaagccggatgtggaccatatcgagggcctg
tcgccggcgatttccatcgagcagaaaacaacgagcaagaacccgcgctcgaccgtcggc
acggtgaccgagatttacgactatatgcgccttctgtgggcgcgcgtcggcatcccttat
tcacccgccaccgggctccctatcgaaagccagacggtgagccagatggtggaccgcatc
atcgcgctgggtgatggcgcccggctttacctccttgcccccatcgcgcgcggccgcaag
ggcgagttcaagaaggaactggccgagctgcagaagcgcggctttcagcgcgtgaagatc
gacggcgagttttacctcatcgaggaagccccggcgctcgacaagaagatcaagcacgag
atcgaagtggtggtggaccgccttgtgatcaaggaaggcctcgcccagcgcttggcagac
agcgtggaaaccgcgctcgagctttctgatggcctgatcatcgtggagatggccgacaag
ccggctgacggcgaagcgccagcccgccacctgatgtccgccaagttcgcgtgcccggtt
tccggcttcacgattgaagagatcgagccccggcttttctccttcaacaacccttatggc
gcctgccccacctgcgacgggcttggcaaccagctctatttcgatcccgaccttgtggtg
cccgatcacaccaagtcgctcatcgatggtgccatcgccgcctggtcgaacaagctgcag
aacccgtcacccttctattttcaggcactggaggccgtggcgcaccatcatggctgcgac
acccgcacgccctggagcaagctgcccgagaaggcgcagaaggcgatcctttatggcacc
ggtaacgaggccatcaccattgtctatgccgacggcaagcggcggtttgaaacccgcaag
ccgtttgaaggcgtgatcaccaatatcgagcggcgctggcgcgaaaccgacagcaactgg
atgcgcgaggaactttcccgctatcaggccgccaccacctgttcggcctgcaacggcgcc
cgcctgaagcccgaagcgttggccgtgaaggtgggcaccagccccatcagtgaaatctcc
agcctgtcggtgaaagccgcgcacgactggttcaccgcgctgcccgatcaactgaccgac
aagcagcaacagattgccgccaaggtactgaaggaaattcaggaccggctcggttttctt
gttaatgtcggactttcatatcttacactaagccgttcatccggaacgctttctggcggc
gaaagccagcgtattcgccttgccagccagatcggctccggcctcacaggcgtgctttat
gtgctcgacgagccctccatcggcctgcatcagcgcgacaacgaccggctgctggaaacg
ctcaagaacctgcgtgatatcggcaataccgtgttggtggtggagcatgacgaggacgcc
attcgtgtggccgactatgtgatcgacatgggaccgggtgccggcgagcatggcggtacg
attgtcgccgaaggcacccctgccgaggtgatggccaacccaaaaagcatgaccggccag
tatctgaccggcgcccgcagcgtgcccatcccggccatgcgccgcaccggccacaagggc
aagaagctgacgatcaagggggccaccgccaacaacctgaaaggtgcgaccgcctcgatc
ccgctcggcaccctcacctgcgtcactggcgtgtcgggctccggcaaatccaccttcacg
atcgagacgctttacaaggccgtcgccaagcatctgaacggtgcccgcgaagtgccgggc
gcgcatgatgccatcgaaggcctgcagcatctcgacaagatcgtggacatcgaccagagc
cccatcggccgcacgccgcgttccaaccccgccacctataccggcgccttcacgccgatc
cgcgactggtttgcgggcctgcctgaagcgcaggcgcggggctacaagccgggccgcttc
tccttcaacgtgaagggcgggcgctgtgaggcctgtcagggcgacggcatgctgaagatc
gagatgcatttcctgccggatgtctatgtggaatgcgaccagtgcaagggcaagcgttac
aaccgcgaaacactggaagttcgctttaaagacaaatcgatatcaggcgttcttgatatg
acggttgaagacggcgtcgagctgttcaaggccgtgcccgctatccgtaccaagcttgaa
atgctcgaaaaagtcggcctcggctatatccgcgttggccagcaggccaccacgctttcg
ggcggcgaagcccagcgcgtgaagctcgccaaggagctttccaaacgctccaccggcaag
acgctttatattctggacgagccgaccaccggcctgcatttcgaggatgtgaggaagctt
ctggaagtcctgcaggcgctcgttgatcagggcaatacggttgtggtgattgaacacaat
ctcgaggtcatcaagaccgccgactggatcatcgaccttggccccgagggcggcgatggc
ggcggcgagattgtggccgtgggcacgcccgaggaagtggccgacaatccgcgcagctat
accggccagtatctggccccggttctcgcccgtgtggcggcagaatag
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