KEGG   Gimibacter soli: PH603_09425
Entry
PH603_09425       CDS       T09793                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
gso  Gimibacter soli
Pathway
gso00230  Purine metabolism
gso00240  Pyrimidine metabolism
gso01100  Metabolic pathways
gso01232  Nucleotide metabolism
Module
gso_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
gso_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:gso00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PH603_09425
   00240 Pyrimidine metabolism
    PH603_09425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gso03400]
    PH603_09425
Enzymes [BR:gso01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PH603_09425
DNA repair and recombination proteins [BR:gso03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PH603_09425
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N EipB_like
Other DBs
NCBI-ProteinID: WCL52758
UniProt: A0AAE9XT51
LinkDB
Position
complement(2010419..2014102)
AA seq 1227 aa
MKINRHFTSTEVCPYAALDWRSATSEIRNPDGSVVFHLADVEVPATFSQVATDIIAQKYF
RKAGVPQALKAVKEKEVPAWLWRKAADETALASMPEEKRYGGEQSAKQVFDRLAGTWTYW
GWKGGYFDSEADARTFFDEMRFMLAAQMAAPNSPQWFNTGLHWAYGIDGPAQGHHYVDFE
TGKLVRSKSSYEHPQPHACFIQSVSDDLVNEGGIMDLWTREARLFKYGSGTGTNFSNVRG
EGERLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDVDHPDIENFINWKVIE
EQKVAALVSGSKLNEIHLNRIIKACWDRRQMLGKDAFDLKANKDLKKEVIAARKVMIPEN
YIKRVIQFAEQGYTSIEFKTYDTDWDSDAYLTVSGQNSNNSIRVTDDFMKAAAEGRAWAL
TNRTTGAVSKELNAKELWSDIGHAAWSCADPGIQFHTTINDWHTCPASGDIRASNPCSEY
MFLDDTACNLASLNLMTFRTEDGGFRIESFSHACRLWTVVLEISVLMAQFPSKEIAKLSY
EYRTLGLGFANIGGLLMSLGLPYDSREGRALCGAITALMTGTSYATSAEMAGELGAFPGY
KKNADHMLRVIRNHRRAAYGQDEGYEGLNTNPVALDIKGCPNAALAAAAAGAWDMALELG
EQHGFRNAQATVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRIVPQALE
VLGYNADQIEAIDKYAVGHGTLDGAPGINHELLRAKGFTDREIGLVEAQLKNAFDIKFVF
NQWTLGADFCTDTLGFDRNQLSDFGFDLLAELGFSKDDVAKANIYCCGAMTLEGAPHLKE
THYAVFDCANACGKIGKRYLSWESHILMMAAAQPFISGAISKTINMPNAASVEDCLKAYE
LSWSLALKANALYRDGSKLSQPLNSALLDDEDLAEDLEDKTLAEKVEIVSERIVERIIEV
ERQGPAKRRRLPERRKGYTQKAIVGGHKVYLRTGEYDDGSVGEIFIDMHKEGAAFRSLMN
NFAIAISIGLQYGVPLEEFVDAFTFTRFEPFGRVEGNEAIKMATSLLDYLFRELAISYLG
RDDLAHASPADLLHDTTGRGDAGDGLPELDHDVTETLERVQKLASSGYVRGTNLVVLKSK
TEKSKKAIKEERELVTATSATGTDGTARVTLGSAMANGGTEATMDARAAARMKGYEGDAC
GECGNFTLVRNGTCLKCDTCGGTSGCS
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgaagatcaaccggcatttcacgtcgacagaagtctgcccgtatgcagcgcttgattgg
cgctcggcgacgagtgaaatccgcaaccctgatggctcggttgtctttcatcttgccgat
gtcgaagtacccgccaccttcagccaggtcgcgaccgacatcatcgcccagaaatatttc
cgcaaggccggggtgccgcaggccctgaaggccgtgaaggaaaaagaggtacccgcatgg
ctgtggcgcaaggctgccgatgaaacggctctcgcctccatgccggaagagaaacgctat
ggcggcgaacagagtgccaagcaagtcttcgaccggcttgctggcacctggacctattgg
ggctggaaaggtggctatttcgatagcgaagccgacgcccgtaccttcttcgatgaaatg
cgcttcatgctggccgcgcagatggccgcaccgaacagcccgcaatggttcaataccggc
cttcactgggcttacgggatcgacggcccggcgcaaggccaccattatgtggatttcgaa
accggcaagctggtgcgttccaaaagctcgtacgagcatccgcagccgcacgcctgcttc
atccagtccgtctccgacgatctcgtcaatgaaggcgggatcatggatctctggacccgt
gaagcgcgcctcttcaaatatggctccggcaccggcaccaacttctcgaacgtgcgcggc
gaaggcgaacggctttcgggcggcggaaaatcctcgggcctcatgagcttcctgaagatc
ggtgaccgtgcagcgggcgccatcaagtcgggcggcacgacccgccgcgctgccaagatg
gtggtagtggatgtcgatcaccccgatatcgaaaacttcatcaactggaaggtcatcgaa
gagcagaaggtggcggccctcgtttccggctccaagctcaacgaaatccatctcaatcgc
atcatcaaggcctgctgggatcgccggcagatgcttggcaaggatgcctttgacctgaag
gccaacaaggacctgaagaaagaggtgattgccgcgcgcaaggtgatgatccccgagaat
tatatcaaacgggtcatccagttcgccgaacagggctatacctcgatcgagttcaagacc
tacgacaccgactgggattcggacgcttatctcaccgtttccggccagaactcgaacaac
tcgatccgggtaaccgacgatttcatgaaggccgctgccgaaggccgcgcctgggcactc
accaaccgcaccacaggtgcggtgtcgaaagagctgaacgctaaggaactctggtccgat
atcggccatgcggcttggtcctgcgccgatcccggcatccagttccacaccacgatcaac
gattggcacacctgcccggcgtccggcgatatccgcgcctccaacccgtgctcggaatat
atgttcctggatgacacggcctgcaatctggcgtccctgaacctgatgaccttccgcacc
gaggatggcggcttccggatcgaaagcttcagccatgcctgccggctgtggaccgttgtg
cttgagatttcggtgctgatggcacagtttccctcgaaggaaattgccaagctttcctat
gagtaccgtaccctcggccttggcttcgccaatatcggtggcctgctgatgagccttggc
ctgccctatgacagccgcgaaggccgcgcgctttgcggtgccatcacggcgctgatgacc
ggcacctcctacgcgacgtccgccgaaatggcaggcgaacttggcgccttcccgggctac
aagaaaaacgccgatcatatgctgcgcgtgatccgcaatcaccgccgcgccgcctacggg
caggatgaaggttatgagggcctgaataccaacccggttgcccttgatatcaaaggctgc
ccgaacgcagcgctcgctgctgctgctgccggtgcgtgggatatggcgctggaacttggc
gagcagcacggcttccgcaacgcgcaggcaaccgtgatcgcacccacgggcaccatcggc
cttgtcatggactgcgacaccacgggcatcgagcctgatttcgcgctggtgaagttcaag
aagctcgccggtggcggctatttcaagatcatcaaccggattgtgccgcaagcgcttgaa
gtgctgggctacaatgccgaccagatcgaagccatcgacaaatatgccgtcggccatggc
acgctggatggtgcgcccggcatcaaccacgaacttctgcgcgccaaaggcttcaccgac
cgcgaaatcggccttgtcgaagcccagctcaagaacgccttcgatatcaaatttgtgttc
aatcagtggacccttggcgccgacttctgcaccgatactttaggtttcgaccgcaaccag
ctgagcgatttcggctttgacctgttggccgagcttggtttcagcaaggacgatgtggcc
aaggccaatatctattgctgtggcgccatgacgctcgaaggcgcaccgcacctgaaagaa
acgcactatgccgtgttcgactgcgccaatgcgtgcggcaagatcggcaagcgctacctg
agctgggaaagccatatccttatgatggcggcagcccagcccttcatctcgggcgccatc
tccaaaaccatcaacatgccgaacgccgcaagcgttgaggactgcctgaaggcttacgaa
ctcagctggtcgctcgcgctcaaggccaatgcgctgtaccgcgatggctccaaactcagc
cagccgctcaactcggcccttctggatgacgaagaccttgccgaggaccttgaagacaag
accctcgccgagaaggtcgagatcgtgtccgaacgcattgtcgaacggatcatcgaggtg
gaacgccagggcccggccaagcgccgccgcctgcccgagcgccgcaagggttacacccag
aaagccatcgtcggcggccacaaggtttacctgcgcaccggcgaatatgacgacggctcg
gtcggcgagatcttcatcgatatgcacaaggaaggcgccgccttccgctcgctgatgaac
aattttgccatcgccatctccataggcctccagtacggcgtaccgctcgaggaattcgtc
gatgccttcaccttcacccggttcgaaccgttcggtcgcgtggaaggcaacgaagccatc
aagatggcgacctcgcttctcgactatctcttccgcgaactggcaatttcctatctcggt
cgcgacgacctggcccatgcctcgccggcagacctgttgcacgacactaccggccgtggt
gacgcgggcgacggcctgccggagctcgatcacgacgtgaccgaaacgctggagcgcgtg
cagaaactcgcttcttcgggctatgtacgcggcaccaaccttgtggtgctgaagtccaaa
accgagaaatcgaagaaagccatcaaggaagagcgcgaattggtgaccgccaccagtgcc
accggcaccgatggcacggcccgcgttacgcttggctcggcgatggcgaacggcggcacc
gaggcgacaatggacgcccgcgcagccgcccgcatgaaaggatatgaaggcgacgcctgc
ggcgaatgcgggaatttcaccctcgttcgcaacggcacctgcctgaaatgcgatacttgc
ggtggcacaagcggctgctcgtga

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