Gimibacter soli: PH603_13680
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Entry
PH603_13680 CDS
T09793
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gso
Gimibacter soli
Pathway
gso03420
Nucleotide excision repair
gso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PH603_13680
03430 Mismatch repair
PH603_13680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gso03400
]
PH603_13680
Enzymes [BR:
gso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PH603_13680
DNA repair and recombination proteins [BR:
gso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PH603_13680
MMR (mismatch excision repair)
Other MMR factors
PH603_13680
BRITE hierarchy
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WCL53584
LinkDB
All DBs
Position
2963721..2966102
Genome browser
AA seq
793 aa
AA seq
DB search
MTNDPFDLSDWANDAPPPAPTPLNVPQAGGEPAYLKGLNPPQREAVLATDGPLLVLAGAG
TGKTRVLTTRLGHLMADGLAAPWNILAVTFTNKAAREMQDRVARVIGAPTEGMWIGTFHS
ICVRILRRHAELVGLQSNFSILDTDDQIRLLKQLTSVENIDDKRWPARQLAALIDRWKNK
ALTPDRVPNGEAQAFANGLGAKLYRAYQDRLKTLNACDFGDLMMHVITIFQAYPDILNRY
HAQFRYIMVDEYQDTNVAQYLWLRLLARGHNNICCVGDDDQSIYGWRGAEVGNILRFSED
FPGAKIVRLEQNYRSTGHILAAASSLIASNEGRLGKTLWTDAGEGDAVRVRGVWDAPEEA
RSIGDEIEALQVKGEPLKEIAVLVRAGFQTREFEERFITLGLPYRVIGGPRFYERAEIRD
AMAYLRVIAQESDDLAFERIVNLPKRGLGETSLQKVHALARERGIPLTRAGRLICGMEDG
LRAAARTSLTRLLDDFDRWREILGTTSHTELAEIVLEESGYTEMWQKDKSPEAPGRLENL
KELVSAMGDFENLGGFLEHISLVMENSNNDSADKITVMTLHAAKGLEFDNVFLPGWEEGI
FPSQRTLDESGVKGLEEERRLAYVGLTRARQRAWVYYAANRQVFGQWQTSLPSRFVEELP
DQHTEVEAAQGLYRSRYERTGGWNSDWTFAEQPEQKGTGYGPGWQRAREWRQSQTASDKP
VVRKIAGARAGGATFSAAKKAETKTVSDFAVGERVFHEKFGYGTVEDVEGNKLLVDFEKA
GAKRVMDNFISRA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgatcccttcgacctcagcgactgggcgaacgatgcaccgccgcccgccccc
acgcccctgaatgtaccgcaggcaggcggcgaacccgcttatctgaagggcctcaatccg
ccgcagcgtgaagccgtactggcgacagacggcccgcttctggtgctcgccggcgccggt
accggcaagacccgcgtgctgaccacccgccttggtcacctgatggcggacggcctcgcc
gcgccctggaacattctggccgtgaccttcaccaacaaggccgctcgcgagatgcaggac
cgggtcgcccgcgtgatcggcgcacccaccgaaggcatgtggatcggcaccttccattcg
atctgcgtgcgaatccttcgccgccatgccgaacttgtagggctgcaatccaatttctcg
atcctcgataccgatgaccagatcaggcttctgaagcagctgacgtcggtcgagaatatc
gatgacaaacgctggcccgcccgccagctggccgctctcatcgaccgctggaagaacaag
gccctgacacctgaccgtgtcccgaacggcgaagcgcaggcctttgcgaacggccttggc
gccaagctttaccgtgcctatcaggaccgcttgaaaacgctgaatgcctgcgatttcggt
gacctgatgatgcatgtgattacgatcttccaggcctaccccgatatcctcaaccgctat
catgcgcagttccgctacatcatggtggatgagtatcaggatacgaacgtcgcccagtat
ctatggctgcggcttctggcgcgcgggcacaataatatctgctgcgtgggggatgacgac
cagtcgatctatggctggcgcggggccgaggttggtaacatcctgcgcttctcggaagat
ttccccggcgcaaagatcgtgcggctggaacagaattaccgctccaccggccatatcctt
gcggctgcgtccagcctgattgcctcgaacgagggccggcttggcaagacgctctggacc
gacgcgggcgaaggcgatgccgtacgggtgcgcggcgtgtgggacgcgcccgaagaagcc
cgttccatcggtgacgaaatcgaagccctgcaggtgaagggcgagcccctgaaggaaatc
gccgtgctggtgcgcgccggtttccagactcgcgagttcgaggaacgcttcatcacgctc
ggcctgccttaccgtgtgatcggtggcccgcgtttctatgagcgtgccgagatccgcgac
gccatggcctatctgcgtgtcatcgcgcaggaaagcgacgatctggcgttcgagcggatt
gtgaacctgcccaaacgcggccttggcgaaaccagcctgcaaaaggtgcatgcgctggcg
cgtgagcggggcattccccttacccgcgccgggcgcctgatctgcggcatggaagacggc
cttcgcgccgccgcccgcacatccctgacccgccttctggatgattttgaccgctggcgc
gagattctggggacgaccagccacaccgaacttgccgaaatcgtccttgaggaatcaggc
tataccgagatgtggcagaaggacaaatcacccgaagccccgggccgccttgaaaacctc
aaggaacttgtctccgcgatgggggatttcgagaatctcggtggcttccttgaacatatc
tcgctcgtgatggaaaacagcaacaacgacagcgccgacaagatcacggtgatgacgctg
cacgccgccaaggggctggagttcgacaatgtcttcctgcccggctgggaagaaggcatt
ttcccgagccagcgcacgctggatgaaagcggcgtgaaggggctggaggaagaacggcgg
ctcgcctatgtgggcctcacccgtgcccgccagcgcgcgtgggtctattatgccgccaac
cggcaggtcttcggccagtggcagacaagcctgccgagccgctttgtggaagaactgcct
gatcaacataccgaggtggaagcggcacagggtttgtaccgctcccgttacgaacgtacc
ggcggctggaacagcgactggaccttcgccgaacagcccgaacaaaaaggcacgggctac
ggccccggctggcagcgcgcccgcgaatggcggcaatcgcaaaccgcaagcgacaagccc
gttgtgcgcaagatcgccggtgcccgcgccggcggcgccaccttcagtgcggcgaagaaa
gccgagaccaaaacggtcagcgactttgcggtgggcgagcgcgtcttccacgagaaattc
ggctatggcacggtcgaagatgtggaaggcaacaagctacttgtcgatttcgagaaagcc
ggcgccaagcgcgtgatggacaatttcataagccgggcctga
DBGET
integrated database retrieval system
