Gimibacter soli: PH603_16070
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Entry
PH603_16070 CDS
T09793
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gso
Gimibacter soli
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gso03009
]
PH603_16070 (rimO)
Enzymes [BR:
gso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PH603_16070 (rimO)
Ribosome biogenesis [BR:
gso03009
]
Prokaryotic type
ribosomal protein modification factors
PH603_16070 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WCL54055
UniProt:
A0AAE9XS87
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All DBs
Position
3482379..3483722
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AA seq
447 aa
AA seq
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MNKPSKVGFVSLGCPKALVDSERILTQLRSEGYEIAADYDGADVVVVNTCGFIDSAKEES
LSAIREAMEENGRVIVTGCLGPEEEKIREVAPGVLAVTGPHQYEAVVNEVHKAAPQPHDP
FTHLVPPQGLRLTPRHYAYLKISEGCNHRCKFCIIPSFRGDLVSRPVRAVLREAEKLVEA
GVQEILVISQDTSAYGVDKKHAAEKWKDKDVRAHMTDLCAALGEMDVWVRLHYVYPYPHV
DDVIPLMAEGKILPYLDIPFQHASPKVLKAMKRPANEQKVLERIHKWRDICPEIVIRSTF
IVGFPGETEEDFQYLLDWLKEARLDRVGCFKYEPVEGAAANELPDQVPEEVKQDRWNRFM
EVAQAISAEKLQERVGLEMAVLIDDVDEDGAVGRTYADAPEIDGKVYLPSATDLIPGTMV
MAYITEATDYDLIGEVVFDDEDEDDDW
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagccttccaaagtgggtttcgtttcccttggctgtcccaaagcccttgtcgac
agcgagcgcatcctgacgcagcttcgctccgagggctatgagattgccgccgactatgac
ggggccgatgtggtggtcgtcaacacctgcggctttatcgacagcgccaaggaagaaagc
ctttcagcgatccgcgaggcgatggaagaaaacggccgggtgatcgtcaccggttgcctc
ggccccgaggaagagaaaatccgcgaagtggcgccgggtgtgctcgccgttaccggcccg
caccagtatgaggccgtggtcaacgaggtgcacaaggccgccccgcagccgcacgacccc
ttcacccatctggtgccgccgcaaggcctgcgcctgacgccgcgccactatgcctatctg
aagatttcggaaggctgcaatcaccgctgcaaattctgcatcatcccgtctttccgcggt
gaccttgtatcgcgcccggtgcgcgcggtgctgcgcgaagccgaaaagctggtggaagcg
ggcgtgcaggaaatcctcgtcatcagccaggacacctcggcttacggcgtcgacaagaag
cacgctgccgaaaagtggaaagacaaggacgtccgcgcccacatgaccgacctttgcgcc
gcgcttggcgaaatggatgtctgggtgcgcctccattatgtgtatccttatccgcatgtg
gatgacgtgatcccgctgatggcggagggcaagatcctgccgtatctggatatccccttc
caacacgcctccccgaaggtgctgaaggccatgaagcgcccggcgaacgagcagaaggtg
ctggagcgtatccacaagtggcgcgatatctgccccgagatcgtcatccgctccaccttc
atcgtcggcttccccggcgaaaccgaagaagacttccagtatcttctggactggctgaaa
gaagcccggctcgaccgcgtgggttgcttcaaatatgagcccgttgaaggggcagccgcc
aacgagctgccggatcaggtgcccgaggaagtgaaacaggaccgctggaaccgcttcatg
gaagtggcgcaggcgatttccgctgaaaagctgcaggaacgcgtcggccttgaaatggct
gtactgatcgatgatgtggacgaggacggcgccgttggccgcacctatgcggacgcgccg
gaaatcgacggcaaggtctatctgccgagcgcgaccgacctcattcctgggaccatggtg
atggcctatatcaccgaagcaaccgactatgacctgatcggtgaagttgtattcgacgac
gaagatgaagatgacgactggtaa
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