Gluconobacter sphaericus: IGS75_02420
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Entry
IGS75_02420 CDS
T07169
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gsp
Gluconobacter sphaericus
Pathway
gsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IGS75_02420 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsp03021
]
IGS75_02420 (rpoC)
03400 DNA repair and recombination proteins [BR:
gsp03400
]
IGS75_02420 (rpoC)
Enzymes [BR:
gsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IGS75_02420 (rpoC)
Transcription machinery [BR:
gsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IGS75_02420 (rpoC)
DNA repair and recombination proteins [BR:
gsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IGS75_02420 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Apocytochr_F_C
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QQX91506
LinkDB
All DBs
Position
complement(471341..475660)
Genome browser
AA seq
1439 aa
AA seq
DB search
MNELMKILGQTGQSVTFDQIKIQLASSEQVRSWSYGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKFRGIVCEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRIATMLDLPLKDVEPVLYFEKFLVLDKGVCESDQIDSYKNGKKRDQYLLDEIRCEDLL
DEYPDAGIDVGIGAEAIKRALSSYDWGIPNDQERDLSLAAKEKGLPDPFDYDADVMEGDS
EKTMMRKKLRKATSEAARKKLVKRLKLVEAFVESGSRPDWMIMDIVPVIPPELRPLVPLD
GGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRMLQEAVDALFDNGRRGRAI
TGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALEL
FKPFIYSKLEKYGHATTIKAAKRMVEKERPEVWDILEEVIREHPVMLNRAPTLHRLGIQA
FEPTLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANG
KPIIVPSQDIVLGLYYLSLEVPEYREAPDEAVIKDGKIVTAAPPAYSDVAEIESAMLSDS
LKLHDKIRLRLQTIDADGKSVRQTIVTTPGRALIAQILPKHQAIPFSLINKQLTKKNVSD
VIDTVYRHCGQKEAVIFCDRLMGLGFRHAARAGISFGKDDMIIPEAKATLVGKTSEEVKE
FEQQYQDGLITAGERYNKVVDAWSRCTDEVQAAMLKEISKQVIGKPTNSVWMMSHSGARG
SPAQMKQLAGMRGLMVKPSGEIIEQPIIANFKEGLSVLDYFTSSHGARKGLADTALKTAN
SGYLTRRLVDVAQDCIIVEPDCGTERGLTVRAVMDSGEVVASLSERILGRTLSKDVVHPV
TQDVILPRNTLIEEAEAELIEKAGVESVDIRSVLTCDSRVGICGHCYGRDLARGTPVNIG
EAVGVIAAQSIGEPGTQLTMRTFHIGGAATRGAEQSMVEASRDGIVTIKNRNVVENSQKV
LVVMSRNCEILLTDENGVERARYRVPYGARLMVSEGEAVTRAQKMAEWDPYTLPIITEQA
GTVEYLDLIDSITLVERMDEVTGLSSKVVVDYKQAAKGVDLRPRLQLKDASGNVVKLANG
NDARYFLSPDSILSVENGAEVNAGDVLARIPREGSKTRDITGGLPRVAELFEARRPKDHA
IIAEGEGRIEFGKDYKSKRCVIVKNDETGEETQYLIPKGKHVSVQEGDFVQKGDPLVDGP
RVPHDILKVMGVEALSDYLVNEIQDVYRLQGVKINDKHIEVIVRQMLQKVEILEPGDSTY
LIGETVDRIEYEGENQRLMENGDTPAKAMPVLQGITKASLQTQSFISAASFQETTRVLTD
AATSGKVDTLNGLKENVIVGRLIPAGTGSVMNRLRSIAASQDRQRVGGASPKAVEDAAE
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactcatgaagatcctgggtcagaccggccagtcggtgaccttcgaccagatc
aagatccagcttgcctccagcgagcaggtgcggtcatggtcttacggcgaaatcaagaag
ccggagaccatcaactaccggacgttcaaacctgagcgtgacggtctgttctgtgctcgt
atctttggtccgatcaaggattacgagtgcctttgcggcaagtacaagcggatgaagttc
cgtggtattgtttgcgaaaaatgcggtgtggaagtcacgctggcgaaggtgcgccgtgag
cgcatgggccatatcgaactggcttcccctgttgcacatatctggttcctgaagtccctg
ccgagccgcatcgccacgatgctggatttgccgctcaaggacgtagagccggttctatat
ttcgagaagttcctggtgctcgacaagggtgtctgtgaatccgatcagatcgactcgtac
aagaacggcaagaagcgcgatcagtacctgctggatgaaatccgctgcgaagacttgctt
gatgaatatcccgacgcgggtatcgatgttggaatcggtgcggaagccatcaagcgtgct
ctgtccagctatgactggggtattccgaacgaccaggaacgcgacctgagccttgcagca
aaggaaaagggcctgccggatccgttcgactatgatgctgacgtcatggagggcgattcc
gaaaagaccatgatgcgcaagaagctgcgcaaagccacttcggaagctgcgcgcaagaag
ctcgtcaagcgtctgaagttggttgaagccttcgtggaaagcggttcgcgtccggactgg
atgatcatggacatcgttccggtcatcccgccggagctgcgtccgctggtgccactggat
ggcggtcgtttcgcgacgtccgatctgaacgacctgtatcgtcgtgtcatcaaccgtaac
aaccgtctcaagcggctgatcgagttgcgtgcgccggacatcattgttcgcaatgaaaag
cgcatgctgcaggaagctgttgacgcactgttcgataacggccgtcgtggccgcgccatc
acgggtgccaacaagcgtccgttgaagtcgctgtccgacatgctgaagggcaagcaggga
cgtttccgtcagaacctgctcggaaagcgcgtcgactattctggccgttcggtgatcgtg
gtcggtccggaactgaagctgcatcagtgtggccttccgaagaagatggcgctggagctg
ttcaagccgttcatctattcgaagctcgagaagtatggtcacgccaccaccattaaggct
gcaaagcgtatggtggagaaagagcgtccggaagtctgggatatcctcgaagaggtgatc
cgcgagcatccggtcatgctgaaccgtgcgccgacgctccaccgtctcggtattcaggcg
tttgagccgacgctgatcgaaggcaaggccattcagcttcatccgctggtctgcaccgcg
ttcaacgccgacttcgatggtgaccagatggccgttcacgtgccgctgtcgcttgaagct
cagctcgaagcccgcgtgttgatgatgtccacgaacaacatcctcagcccggcgaacggt
aagccgatcatcgtgccgtctcaggatattgttctgggtctgtattatctgagcctcgaa
gtgccggaatatcgcgaggcacctgacgaagctgtcatcaaggatggtaagatcgtcacg
gcagctccgccggcttactcggatgttgctgaaatcgagagcgctatgctttcggattcg
ttgaagctgcatgacaagatccgtctgcgtctgcagacgatcgatgcagacggcaagtcg
gtccgtcagacgatcgtgacgacgccgggtcgcgcgttgattgcgcagattttgccgaaa
caccaggccattccttttagcctgatcaacaagcagttgacgaagaagaacgtgtccgac
gtgattgacacggtctatcgtcactgtggtcagaaggaagccgtgattttctgtgaccgc
ctgatggggcttggtttccgtcacgcggctcgcgccggtatttcctttggcaaggatgac
atgatcattcctgaagctaaggcaactctggttggcaagacttcggaagaggtcaaggag
ttcgagcagcagtatcaggatggtctgatcacggctggcgagcgctacaacaaggtggtt
gatgcctggtcacgctgcacggacgaagttcaggctgcgatgctcaaggagatctccaag
caggttatcggtaagccgacgaactcggtctggatgatgagccactccggtgctcgtggg
tcgccggcccagatgaagcagctcgccggtatgcgcggtctgatggtgaagccttcgggc
gagatcatcgaacagccgattatcgcgaacttcaaggaaggtctgtcggttcttgattac
tttacgtccagccatggtgcccgtaagggcctcgccgatacggcgctgaagaccgcgaat
tcgggttatctgacgcgtcgtctcgtcgatgtggctcaggactgcatcattgtggagccg
gattgcggtacggaacgtggtctgacagtccgtgcagttatggatagcggcgaagtcgtt
gcttctctgtccgagcgtattctgggtcgtaccttgtccaaggatgtggtccatccggtg
acgcaggatgtcatcctgccgcgtaatacgctgatcgaggaagccgaggccgagctcatc
gaaaaggctggtgtggaaagtgtcgatatccgctctgtcctgacttgtgatagtcgtgtc
ggcatctgcggtcactgctatgggcgtgatctggcccgaggtactccggttaacatcggt
gaggctgtcggcgttatcgctgcccagtccatcggtgagccgggtacccagctgacaatg
cgtaccttccatattggtggtgcggcaacgcgtggtgccgagcagtctatggtcgaagcg
tcacgcgatggcatcgtgacgatcaagaaccgcaacgtcgttgagaactcgcagaaggtt
ctggtcgtgatgtcgcgtaactgcgagatcctgctgaccgacgaaaacggtgtggaacgt
gcccgctaccgtgtgccttacggtgcgcgtctgatggtctcggaaggcgaagcggtgacg
cgggcacaaaagatggccgagtgggacccgtacaccctgccgatcatcactgagcaggct
ggtaccgtcgagtatctcgacctgatcgatagcatcacgctcgtggagcgcatggatgaa
gtcacgggcttgagctcgaaggtcgttgttgactacaagcaggctgcaaagggtgtagat
ctgcgtccgcgcctgcagctcaaggatgcttccggcaacgtggtcaagctggccaatggc
aatgacgcccgttacttcctctctccggacagtattctgtcggtggagaacggagcggag
gtcaacgccggtgacgttctggctcgtattcctcgtgaaggctccaagacgcgtgatatt
acaggtggtctgccgcgcgtggcagaactgtttgaagcacgtcgtccgaaggatcatgcg
atcatcgccgaaggcgaaggccgtatcgaattcgggaaggattacaagtccaagcgctgc
gtcatcgtcaagaacgacgagacgggtgaagagacccagtatctcattccgaagggcaag
cacgtttctgttcaggaaggcgactttgtccagaagggcgatccgctggtcgatggtccg
cgcgtgccgcatgacattctcaaggtcatgggcgtcgaggcgctgtccgactatctcgtc
aacgagatccaggatgtctatcgactgcagggcgtgaaaattaatgacaagcacatcgaa
gtcattgttcgccagatgctgcagaaggtggaaatccttgagccgggtgactcaacctac
ctgatcggtgagacggtggaccgtatcgagtacgagggtgaaaaccagcgtctcatggag
aacggggatacgccggcaaaggctatgccggttctgcaaggtatcaccaaggcgtccctg
cagacgcagtccttcatctcggcggcctccttccaggagacaacgcgtgtccttacggat
gcggcaacgtcaggtaaggtggatacgctcaatggtcttaaggagaacgtgattgtcgga
cgtttgatcccggcaggaaccggcagtgtgatgaaccgtctccggagcattgctgccagt
caggaccgtcagcgtgttggtggagcgtctccgaaggccgtcgaagacgcagcggaatga
DBGET
integrated database retrieval system
