Gluconobacter sphaericus: IGS75_03790
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Entry
IGS75_03790 CDS
T07169
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gsp
Gluconobacter sphaericus
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsp03016
]
IGS75_03790 (rnd)
Enzymes [BR:
gsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IGS75_03790 (rnd)
Transfer RNA biogenesis [BR:
gsp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IGS75_03790 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QQX91741
LinkDB
All DBs
Position
complement(777171..778361)
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AA seq
396 aa
AA seq
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MRSKAPTFPTPVLLTSSEELARICEKLQNEPFVTIDTEFVRERTYWPELCLVQLAGTEDV
VLIDTLAPGIDLAPLGALLAKPDCTKVFHAARQDLEIFLHIFDRLPVSVFDTQVAAMVAG
FGDQVGYDSLVGAITGRSIDKAHRFSDWSARPLSAAQLAYAAADVTHLRTVYEALRKQLA
EQDRLHWADSEQAILTEEKTFRPDPRRLWEKLKARTSNRRMLGILREVTAWREQEAQNAD
IPRQRVIRDESLLEIAAVHPDTVEALSRIRGVTKGFADGKMGKGLLEAIRIAQTLPESEL
PKPPSKSERARPSAALVALLRVLLAAKCEDHKVAPRLVASSDDLDLIALGETDVGALKGW
RRELFGLDAQALVRGEIALAVVNGLVELQRVAKPVA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgaaagctccgaccttcccgacccccgttctcctgacctccagtgaagagctg
gcccgtatctgcgaaaaattgcagaacgagcctttcgtgacgatcgacacggaatttgtc
cgggaacggacctactggcccgagctctgtctcgtgcagctcgccggaaccgaagatgtt
gtcctgattgacactctggcgcccggtattgatcttgccccgcttggcgcccttctggcc
aagccggattgcaccaaggtctttcatgccgcccggcaggatcttgagatctttctccat
attttcgatcgcctccctgtctcggtttttgatacgcaggtcgctgccatggtggcgggc
ttcggcgatcaggtcggatatgacagcctggtcggtgcaatcaccggccgcagcatcgac
aaggcgcaccgcttcagtgactggtcggcccgtccgctaagcgcggcgcagctcgcctat
gccgccgctgacgtcacccatctgcgaacggtctatgaggcgcttcgcaaacagcttgcc
gagcaggaccgtctgcattgggccgactccgaacaggcgatcctgacggaagaaaaaaca
ttccgtcccgatcctcgtcgcctgtgggaaaagctgaaagctcgcaccagcaatcgccgg
atgctcggcatcctgcgtgaagtcaccgcctggcgcgaacaggaagcgcagaatgccgat
attccccgtcagcgcgtcatccgtgatgaaagcctgttggaaatcgcagccgttcatccc
gatacggtcgaggctctgtcccgtatccggggtgtgaccaaagggtttgccgacggaaag
atgggaaagggtcttctggaagcgatccgtattgcgcagactcttccagagtctgaattg
ccaaagcctccttcgaaatccgaacgcgcccgcccgtctgcggctctcgttgcacttctg
cgggttctgttggcggccaagtgtgaggatcacaaggtggcgccccgtctggtggcttct
tcggacgatctggatctgattgcccttggcgaaaccgatgttggtgcgttgaaaggatgg
cggcgtgagcttttcggtctggatgcccaggcgctggtccgcggagaaattgctttggcc
gtggtgaacggcctcgtagagcttcagcgcgtcgccaagccggtcgcataa
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