Gluconobacter sphaericus: IGS75_04540
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Entry
IGS75_04540 CDS
T07169
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gsp
Gluconobacter sphaericus
Pathway
gsp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IGS75_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsp03400
]
IGS75_04540
Enzymes [BR:
gsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IGS75_04540
DNA repair and recombination proteins [BR:
gsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IGS75_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Phage_Gp111
IBP39
Motif
Other DBs
NCBI-ProteinID:
QQX92305
LinkDB
All DBs
Position
complement(944450..945928)
Genome browser
AA seq
492 aa
AA seq
DB search
MVEDSAAFEPWREMARAALQCAIPPEAIDWRIRGGETDLFGQLADTDDGMEALTAAPFAK
TVTLRASCIALLRDMLCHSDPGRFALAYRIAWRVQGNPHLLDVATDADIAKARIMVRQNR
QDCHKMMAFVRFREQPVQSDEGEGRRRFLAWFEPQHHILERIAPFFSKRFTDMDWMILTP
RGSICWNGKDLAYSAEACEQPELDDGFGDLWNTYYASTFNPARVRTKAMRREMPGRYWKD
LPETRLIPQLVSGAEARVRAMAEQELQPAPAFHERLRSREERPVEFLPDLPESLDGLAAR
IRTCTSCPLHCSATQAVVGEGLANARIMVVGEQPGDQEDLAGRPFVGPAGQLLHEALGEA
GVDRSALYLTNAVKHFRFRLQGRRRIHQNPDAGHVAACRPWLEQEIALIRPKLIVSLGAT
ALRALDGPGMAMSDIRGTSWTVGTGENAVRRLALAHPSWLLRLGEGAQGEGERQRFVEGL
GRLRNFPDQSGL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggacagtgccgcgtttgagccctggcgggagatggcccgcgcggcattgcag
tgcgcaatcccgcccgaagccatcgactggcgcatccggggtggcgagacggatcttttc
ggacaactcgcggacacggacgacgggatggaggcgctgacggcggccccttttgcgaaa
accgtgacattgcgggcgtcctgtattgcgctgctgcgggacatgctgtgccattccgat
cccggccggttcgcgctcgcctaccggatcgcctggcgggtgcagggcaatccgcatctc
ctggatgtggcgaccgacgccgatatcgccaaagcccggatcatggtgaggcagaaccgg
caggactgtcacaagatgatggcttttgtccgcttccgcgaacagccagtacaatcggat
gaaggggaggggcggcgacgctttctcgcatggttcgagccgcagcatcatatccttgaa
cgtatcgccccgttcttttcgaagcgcttcacggatatggactggatgatccttaccccg
cgtggctcgatctgctggaacggcaaggatcttgcctactctgcggaagcctgtgagcag
ccggaactggacgacgggttcggggatctgtggaacacctattacgcctccactttcaat
cccgcccgcgtccgtacgaaagcaatgcgccgcgaaatgccgggccgttattggaaagac
ctgcctgaaacccgcctgatcccgcagcttgtctcgggtgcggaagcgcgggtccgggcg
atggccgagcaggagctccagcccgccccggcttttcatgagcggctgcggtcccgtgag
gagcgtccggtggaattcttgcctgacctgccggagagccttgacggactggcggcccgg
atccgcacctgcacgtcctgcccgctacactgttcggcgacgcaggctgtcgtcggggaa
gggctagccaacgcacgcatcatggtcgtcggagagcagccgggcgatcaggaggatctg
gcagggcgtcctttcgtcggtccggcaggacagcttctgcatgaggcgctcggagaggcc
ggggtcgatcgtagtgcgctgtatttgacgaatgccgtcaaacatttccgtttccgtctt
caggggcgtcggcgcatccatcagaacccggatgcagggcatgtggcggcttgccgcccc
tggctggagcaggaaattgcgctgattcgtccgaaactcatcgtatcgctgggggccacg
gcactcagggcgctggacgggccgggcatggcgatgtcggatattcgcgggacgtcatgg
accgtgggaactggcgaaaatgccgtccggcgtctggcgcttgcccatccgtcctggttg
ctgcggctgggggagggggcccagggtgagggcgagcggcagcgcttcgtagaggggctc
ggccgtctgagaaactttccggatcaatcggggttgtag
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