Gluconobacter sphaericus: IGS75_08470
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Entry
IGS75_08470 CDS
T07169
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gsp
Gluconobacter sphaericus
Pathway
gsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IGS75_08470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsp03019
]
IGS75_08470
03009 Ribosome biogenesis [BR:
gsp03009
]
IGS75_08470
Enzymes [BR:
gsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IGS75_08470
Messenger RNA biogenesis [BR:
gsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IGS75_08470
Ribosome biogenesis [BR:
gsp03009
]
Prokaryotic type
rRNA helicases
IGS75_08470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QQX90261
LinkDB
All DBs
Position
1776372..1778183
Genome browser
AA seq
603 aa
AA seq
DB search
MPFPDTHPALKRALEARGYEQLTPVQEAVLQPGLDERDLLVSAQTGSGKTVAFGLAIAPT
LLGDADRLPPSPQPMALVIAPTRELALQVQSELKWLYAETGARIASCIGGTDARSEAREL
NRGAHIVVGTPGRLCDHLSRGSLDLSALRCVVLDEADEMLDMGFREELEQLLDAAPAERR
TLLFSATIAREIASLARRYQKNAERIDTVSGAKQHSDITYRCVITQPQEIERSLVNVLRF
YESPTAMVFCNTRMMVNQVQAALLERGFASVAISGEMGQNERSRAIESLRSGQARVCVAT
DVAARGIDVPALSLVIHASIPTAAETLLHRSGRTGRAGRKGTSVLMVPLNQRRRAERLLQ
MAKIQAEWEAVPTADAIAEQDKTRLMDDPILTNAVDDMSDELVNQLVEKYDATKLAAALV
GLYRARLPKVEQIRPMSVEAPRRTERGERAPREEHTMSGEWFKMGVGRTERADPKWLIPL
ICRLGGVQKREIGSIRIDQEQTYFQIADESVARFKSCLAGAEADEVTIEPSEAPAGGMGP
RGRNPGEGKRFGGGGRSGGGFKGGPRGGAGGGYKGRGGSGYGRPKPAAGDGPRGDGSSRK
RRS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcccgatacccatcctgcccttaagcgcgcccttgaggcacgtggctacgaa
cagctgactcctgttcaggaagccgttctgcagccggggctggacgagcgcgacctgctg
gtttccgcgcagacggggtcgggcaagaccgtcgccttcggcctggccatcgctccgacc
ctgctcggagacgccgatcgccttccgccgtcccctcagcccatggcgcttgtaattgcg
ccgacgcgtgagctggcgcttcaggtccagtccgaactcaaatggctctatgccgaaacc
ggcgcccgcatcgcgagctgcattggcggcaccgatgcccgcagtgaagcccgtgagctg
aaccgtggcgcccatatcgtggtcggaacccccggccgcctgtgcgaccacctgtcgcgt
ggctcgcttgacctgtccgccctgcgctgcgtcgtgctcgatgaagctgacgaaatgctg
gatatgggctttcgcgaggagctggagcagcttctcgatgccgccccggccgagcgccgt
acactgctattctcggcaacgatcgcccgcgagatcgcctcgctggcacgccgttaccag
aagaatgccgagcgtatcgacacggtttcgggtgccaagcagcattccgacatcacctat
cgttgcgtcatcacgcagccgcaggaaattgagcgctcgctcgtcaacgtgcttcgtttc
tacgagagcccgacggccatggtgttctgcaatacccgcatgatggtcaatcaggtgcag
gccgccctgcttgagcgcggttttgcgtccgtcgccatttccggcgagatgggccagaac
gagcgcagccgtgcgatcgagagcttgcgctccggtcaggcccgtgtctgcgttgcgact
gatgttgcagcccgtggtattgacgtgccggccctgagcctcgtgattcatgcgagcatt
ccgacggcggccgaaaccttgctgcatcgctcgggccgtacggggcgtgcaggtcgcaag
ggcaccagcgtgctgatggttccgttgaaccagcgtcgccgggccgagcgcctgcttcag
atggcgaagatccaagccgaatgggaagccgttcccacggccgatgcgattgccgagcag
gacaagacccgtctgatggacgatccgatcctgaccaatgccgtggacgacatgtccgac
gagctggtcaaccagctggttgagaagtacgacgccaccaagcttgcagcggctctggtt
ggtctgtatcgtgcgcgtctgccgaaggttgagcagatccgcccgatgtccgttgaggcg
ccgcgccgcacggagcgtggcgagcgtgcaccgcgcgaagagcacaccatgtccggtgaa
tggttcaagatgggcgttggtcgtaccgagcgtgccgatccgaagtggctgatcccgctg
atctgccgtctgggtggtgtgcagaagcgcgaaattggtagcatccgtatcgatcaggaa
cagacctatttccagatcgcggatgagagcgtggctcgcttcaaatcctgcctcgccggc
gcggaagccgacgaagtgacgatcgagccgtccgaggcccctgccggtggcatgggcccc
cgtggtcgtaacccgggtgaaggtaagcgctttggcggcggtggccgttcgggcggtggc
ttcaagggcggtccgcgcggtggtgccggcggcggttacaaggggcgcggcggttcgggc
tatggtcgtccgaagcccgcagccggtgatggcccgcgcggtgacggttcgagccgcaag
cgccgttcctga
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