Gluconobacter sphaericus: IGS75_10940
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Entry
IGS75_10940 CDS
T07169
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gsp
Gluconobacter sphaericus
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsp03016
]
IGS75_10940 (thpR)
Enzymes [BR:
gsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IGS75_10940 (thpR)
Transfer RNA biogenesis [BR:
gsp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IGS75_10940 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QQX90670
LinkDB
All DBs
Position
complement(2310398..2310961)
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AA seq
187 aa
AA seq
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MRLFVALDLPADVRETLALMRGSMPGVQWVPAENHHITLRFIGEITDRHRLEEIDLTLSR
LAWQPFEISLAQADIREGLTADSLLIGVERTRQLDALQSQVESALRRAGCPPAKRRFQPA
ITLGHFFPNQRADAIKWVQRHNLFRSKPISVEHVTLFESMRSQGEHVYVPREEYAWQPDM
PLIPEEE
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgagactttttgtcgcactcgaccttcctgccgatgtccgggaaacgcttgcgctgatg
cgcggttctatgcccggcgtgcaatgggttccggccgaaaaccatcacatcaccctccgc
ttcattggagagatcactgatcggcaccggctggaagaaatcgacctcaccctctcccgc
ctcgcctggcagcctttcgaaatttccctcgctcaggctgacattcgcgaaggtctcacg
gcggacagcctcctgatcggggtcgaacgcacccgccaactggatgcgttgcaatcccaa
gtcgaaagcgcccttcgccgtgctggctgcccaccagcaaagcgccgcttccagcccgcc
atcacccttggacattttttcccgaaccagcgggcggacgccatcaaatgggtccagcgg
cacaatctcttccgcagcaaacccatctccgtagagcatgttacacttttcgaaagcatg
cggagccagggcgaacacgtttacgttccccgcgaagaatatgcctggcagccggacatg
ccgctgatccccgaggaagaatga
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