Gluconobacter sphaericus: IGS75_13315
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Entry
IGS75_13315 CDS
T07169
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gsp
Gluconobacter sphaericus
Pathway
gsp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IGS75_13315 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsp03019
]
IGS75_13315 (recQ)
03400 DNA repair and recombination proteins [BR:
gsp03400
]
IGS75_13315 (recQ)
Enzymes [BR:
gsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IGS75_13315 (recQ)
Messenger RNA biogenesis [BR:
gsp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IGS75_13315 (recQ)
DNA repair and recombination proteins [BR:
gsp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IGS75_13315 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
QQX91067
LinkDB
All DBs
Position
2817846..2819714
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AA seq
622 aa
AA seq
DB search
MTQAQNSPPVAPGLNQPPTPEDVLAEVFGFPGFRGLQQDAVKTVMQGEDVLVLMPTGGGK
SLCYQVPALCREGMGLVISPLIALMDDQVAGLRQLGVRAAALHSGLEPDERDELQSDLRN
GRIDILYISPERLLQPATANFLSKRQISLIAIDEAHCISAWGHEFRPEYRALASLPEMFP
GVPRIALTATADPRTRDDILNALGMPDARVLMASFHRPNLIVEARAKASESRQLLETLQN
HREGASIVYCGSRNKTERVATMLRDKGLTALPFHAGLSSVEKRATLMRFRSGEEMVIVAT
IAFGMGIDRPDVRCVVHLDMPSSPEAYYQQIGRAGRDGEPSDTLLLYGGEDMARARYWLE
QSSAPDHEKRVMQARLESMIAITETTGCRTQALLACFGENLAQPCGHCDNCINPVSTFDG
TQAAQKVLSAIYRTGQRLGAVQLSNVLRGKLNETIERNAYQHLSVFGIGKEQSEQWWRAV
IRQLIARGAIRMHGEYGSLALQSEIARPILRGEERIALRLEARPALTASAGSDGNTENDR
LSADEKPYFDALRQWRLSEAREQEIPPYVIFHDSVLRDIAREQPASRTELGSIKGVGASK
LDRYGAAVLTVLREIREPASAQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggctcaaaacagccctcccgtcgccccgggattaaaccagcctccgacgcct
gaagatgtgctggcggaagtttttggcttccccggcttccgcggccttcagcaggacgcc
gtcaaaacggtcatgcaaggggaggacgtgctcgtccttatgccgacgggtggaggcaag
agtctgtgctatcaggttcccgcactttgccgggaaggcatgggtttggtcatttccccc
ctgatcgccctgatggacgatcaggttgcgggcctgagacagctcggcgtccgcgcggcc
gcactgcattccgggcttgagccagacgaacgtgacgaacttcagagcgatctgcgcaat
ggccggatcgatattctctacatttcgccagagcgcctccttcagcctgcgacagcgaat
ttcctgtcaaaacgccagatatcgctgatcgcgattgacgaagcacactgcatttcggcc
tggggccacgaattccgccctgaataccgggcactcgccagcctaccggagatgttcccg
ggcgtcccgcgcattgccctgactgctacggctgatcctcggacgcgtgatgatattctc
aacgcactcgggatgcccgatgcacgggtcctgatggcaagcttccatcgtcccaacctg
atcgtggaagcccgcgccaaggccagcgaaagccggcagctcctcgaaacacttcagaac
catcgcgaaggcgcctctatcgtatattgtggcagtcgcaacaagacggaacgcgtcgcc
accatgctgagggacaagggcctgaccgccctgccattccatgccggcctttcctcggtc
gagaagcgggccacactgatgcgcttccgctcaggcgaggaaatggtgatcgtcgccacg
atcgcattcggaatgggcatcgaccgcccggacgtacgctgcgtcgtccatctggacatg
ccgtcctcgccggaagcgtattaccagcagatcggacgggcagggcgcgatggcgagccg
tccgacacgcttttgctctatggcggggaggacatggcccgggcacgatactggctagaa
cagtccagtgcccccgatcacgaaaaacgcgtcatgcaggcgcgtctggaaagcatgatc
gccatcacggagaccacaggctgccgcacgcaggcgctgctcgcgtgtttcggagaaaat
ctcgcgcagccctgcggtcattgcgacaactgcatcaacccagtctcaacattcgatggc
acacaggctgcccagaaggtcctctcagccatttatcgcaccggtcaacgtctcggagcg
gtccagctttccaatgtgttacgtggaaagctcaacgaaaccatcgaacgtaatgcctat
cagcatctttcagttttcggaatcggcaaggaacaaagcgagcagtggtggcgcgctgtc
atccgccaattgatcgcgcgcggagccatccgaatgcatggcgaatatggaagtctcgcg
cttcagagcgaaatcgcgcgcccgatcctgcgcggcgaggagcgcatagcgctccggctg
gaagccaggccagccctgaccgccagcgcgggctcggacggcaatacggaaaatgatcgt
ctgtcagcagatgagaaaccgtatttcgatgccctccgccagtggcgcttgtccgaagcg
cgggaacaggaaatccctccctatgttattttccacgattcggtattgcgagacatcgcc
cgcgaacagcctgccagccgcactgaactgggaagtatcaagggcgtcggcgcctcaaag
ctggaccgctacggtgcagcggttctgaccgtcttacgcgaaatccgcgaacccgcctct
gcccagtaa
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